Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014- 10-24] 779 sequences; 17,256,624 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq95 178 2e-39 seq6 89.7 6e-13 >seq95 Length=57217 Score = 178 bits (196), Expect = 2e-39 Identities = 717/1122 (64%), Gaps = 37/1122 (3%) Strand=Plus/Minus Query 106095 CCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGG 106154 ||||||| ||| | ||||| | |||| || |||||| || || | | |||||||| Sbjct 51640 CCCACATGTCATACTGAAGGATACCTTTAGAAAGGGGAGAGCCTTCGTAAGACTCATAGG 51581 Query 106155 AACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAA 106214 ||| || | ||||| | || || ||||| || | ||||| || ||||| || | Sbjct 51580 TACCCTGTTCCTCAGCAAGCTCGCATGAAGCCTCAAGCGCCGCGTGGTAAATGGTCTCGA 51521 Query 106215 AGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAA 106269 |||| | ||| | |||| |||| ||| || || || |||| || | || | Sbjct 51520 AGATCTGGATATTGAGCTCCCTGGCCTCAAGAGAGTCGAACGGCATGCGAAGGGCCATGA 51461 Query 106270 AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA 106329 || | || ||||||||||| ||||| | |||| ||||| || ||||| || || Sbjct 51460 AAG-----CGTCAGCGAGACCTTGGACACCAAGGCCAACAGGTCGATGGCGCATGTTGGA 51406 Query 106330 CTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTT 106386 || || || |||| || ||||| | || | | |||||| || || || || Sbjct 51405 GTTGCGGGC---CTCAGGCACTGGATAGTAGTTACGGGTAATGACAGTGTCGAGGTTCTT 51349 Query 106387 GGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATT 106446 || ||||| ||| || || ||||| || || | | || | |||| || || Sbjct 51348 GGCAACAACCTTGGTAATCTCATGCAGCTTCTTGAAGTCGTAGACGCGACGTTCAAGATC 51289 Query 106447 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 106506 || | ||||| || | || || | || || || || |||||| | | Sbjct 51288 CACGAAGGCAGGAAGAGCAAGAGAAGCGAGGTTACAGACGGCAACCTCATCGGGAGAAGA 51229 Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACT---CTTAATCGTCCCCAAATTCTTTTG 106563 ||||| | |||||| ||||| | || ||| |||||| || || | | |||||| Sbjct 51228 ATACTCCATAATTTCAGTACAGAGATT---ACTGGACTTAATGGTACCAAGGTGCTTTTG 51172 Query 106564 GTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 106623 ||| ||| |||| |||||||| || ||||| || || ||||| ||||| Sbjct 51171 GTTGGACTTGGAGTTGGCGGCATCCTTATAACAGATGTAAGGGACACCAGTCTCTGTCTG 51112 Query 106624 TGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGT--CC 106680 | || || || || ||| | | || | |||| | | | || ||| | || Sbjct 51111 AGCCTCAAGGATAGCGAACCAAAGCTTCTG-GGCTTTGATAGTTT--TTCTCCCCTTACC 51055 Query 106681 CTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACC 106740 || | |||||| | ||| || ||||| || || || |||||| || || Sbjct 51054 CTGCCTCTCGTAGCTCTCGTAAAGCTTCTCAAATTCTTCTCCGTATACGTCGGCAAGCCC 50995 Query 106741 TGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAA 106800 || || | ||||| | ||| | ||| | ||| | || || ||||||||||| Sbjct 50994 AGGACACTCAGCGGGACACATAAGGGTCCAGTCCCCATCGGATTCGACACGCTTCATGAA 50935 Query 106801 AAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTG 106860 ||| || || ||||| |||| | || ||||| | | || |||| || | ||| || Sbjct 50934 AAGATCGGGGATCCAGAGGGCGTAGAAAAGATCACGAGCTCGTACCTCCTCCTTACCATG 50875 Query 106861 GTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGC 106920 ||| | ||| |||| ||| || | | ||| |||||||| ||||||||||||| || Sbjct 50874 GTTCTTCCTTAAGTCAATGAAATCAAATACATCAGCGTGCCAGGGCTCAAGATAGATGGC 50815 Query 106921 GATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAA 106974 || | || ||||| ||| |||| | || || || || ||||||| | | Sbjct 50814 GAAGGCACC---AGGACGCTTGTTGCCACCTTGGTCAACGTATCGAGCAGTGGCGTCATA 50758 Query 106975 TACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTT 107034 | || ||||| ||||| ||||| | || | ||| || || || ||| || Sbjct 50757 AGCTCGGAGCATAGGAATGATACCGTTAGAGTAACCGTTGGTACCGGCAATGTAGGAGCC 50698 Query 107035 ATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGC 107094 || || | | || || ||||| | |||||||| ||||| ||| ||||| || || Sbjct 50697 CTTCGCACGGATATTGTGAATGTGAAGACCAATACCACCAGCGGTCTTGGAGATCTGAGC 50638 Query 107095 ACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAA 107154 ||| | | ||||| | |||||||| | || || || ||||| |||| | || || Sbjct 50637 ACAAGTCTTGAGAGTATCGTAGATACCATCAATGGAATCATCCTTCATGGCTACGAGAAA 50578 Query 107155 GCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAG 107196 ||| |||||||| || | || ||||| |||||||| || Sbjct 50577 GCATGATGACATCTGGGGCCGGGGAGTACCGGCATTGAAAAG 50536 >seq6 Length=242052 Score = 89.7 bits (98), Expect = 6e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || |||||||||||| || || || || || || || |||||| || || Sbjct 183841 GGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTGAGACC 183782 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||||||||| |||||||| | ||| | || | | ||| || || ||||||||||| Sbjct 183781 AGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAACCAGAGAAGAAGAT 183722 Query 117393 ACCCTCCAC 117401 ||| || || Sbjct 183721 ACCTTCGAC 183713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589975055061960