Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014- 10-24] 779 sequences; 17,256,624 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq6 174 3e-38 >seq6 Length=242052 Score = 174 bits (192), Expect = 3e-38 Identities = 185/244 (76%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||| | ||||||||||| |||| | || ||||| || ||||||| |||| |||| Sbjct 183851 AGAGGAGACAGGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGA 183792 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 || |||||||||||||| || | || ||||||||||| || | |||||||| |||| Sbjct 183791 AGGTGAGACCAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAACCAG 183732 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302 |||||||||| || || || || ||||| ||| |||| | ||| |||||| ||| || Sbjct 183731 AGAAGAAGATACCTTCGACGGCAGCGAAAGCGATGAGTCGCTCACCGAAACAAGATCGCT 183672 Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362 |||| |||||||| ||| |||||||| |||||||| ||| || || || || || | Sbjct 183671 TGTCAGAGATCCATCGAAGAGCCCAGTCGGCCTTCTTTCGGATACAAGGGATGGTGTCCA 183612 Query 48363 TGGC 48366 | || Sbjct 183611 TAGC 183608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931523729199360