Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014-
10-24] 779 sequences; 17,256,624 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq163 98.7 7e-15
seq21 95.1 9e-14
>seq163
Length=95501
Score = 98.7 bits (108), Expect = 7e-15
Identities = 77/92 (84%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 432279 AGATTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATG 432338
|| || | ||| |||||||||||||| ||||| |||||||||||||||||||||||| |
Sbjct 87075 AGGTTAAAAGGAAAAGAAGGTCGTATGAGAGGTAATTTGATGGGAAAGCGTGTCGATTTT 87134
Query 432339 TCTGCACGTACAGTTATTACTTCTGATCCTAA 432370
|| || || || ||||||||| |||||| ||
Sbjct 87135 TCAGCGCGAACGGTTATTACTGGTGATCCCAA 87166
Score = 87.8 bits (96), Expect = 1e-11
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192
||||| | ||||| | |||| |||||| |||||| | ||| |||| ||| | || |||
Sbjct 88844 GAATTCTGGTTCCACGCTATGGGTGGTCGAGAAGGTTTGATTGATACCGCTGTCAAGACT 88903
Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252
|| || ||||||||||| ||||||| | | |||||| | | || || | || |
Sbjct 88904 GCCGAGACTGGTTATATCCAAAGAAGATTGGTCAAGGCGATGGAGGACTTGAAGGTTGCT 88963
Query 435253 TATGATGGTACAGTGAGAAAT 435273
||||| ||||| |||||||||
Sbjct 88964 TATGACGGTACTGTGAGAAAT 88984
>seq21
Length=50189
Score = 95.1 bits (104), Expect = 9e-14
Identities = 139/193 (72%), Gaps = 3/193 (2%)
Strand=Plus/Plus
Query 400294 AAATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTT 400353
|| || || || ||| |||| || |||||||| || ||| | ||||| | || ||||||
Sbjct 6648 AACTGCACTCTCATTCTGACGGAAGGAGATTCTGCCAAAGCTCTCGCTGTTTCCGGCCTT 6707
Query 400354 AATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTT 400413
||| | ||| | ||| | ||||| |||||||| || ||||| |||||| | || |||
Sbjct 6708 GCAGTTGTCGGACGCGATGAATATGGCGTTTTCCCTCTCAGAGGTAAACTTCTCAACGTT 6767
Query 400414 AGGGATGCTAGTCCTaaaaaaaTTGCCGATAATGAGGAAATTACAGCA-ATCaaaaaaaT 400472
| || ||| ||| | | |||| | |||||||||| | ||||| ||||| | ||
Sbjct 6768 CGCGAAGCTGGTCACGACCAGATTGTAAAAAATGAGGAAA-TCCAGCATATCAAGCAGAT 6826
Query 400473 TGTTGGACTTGAA 400485
| |||| |||||
Sbjct 6827 T-TTGGGTTTGAA 6838
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740592154392054
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |