Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014- 10-24] 779 sequences; 17,256,624 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq6 98.7 1e-15 >seq6 Length=242052 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 137209 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 137268 |||| || || || || || |||||||||||| | || | || || |||||| Sbjct 168807 TGAAGAGTTGACTCCTTCTGGATGTTGTAATCGGAAAGAGTACGACCATCCTCAAGTTGT 168866 Query 137269 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 137328 ||||||||| |||||| ||||||||||| ||||| || || || ||||| ||| || Sbjct 168867 TTACCAGCAAAGATCAATCGTTGCTGATCAGGAGGGATACCCTCCTTGTCCTGAATCTTC 168926 Query 137329 TGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 137388 || | | || | |||||| | || || ||||||| ||| | || |||||||| Sbjct 168927 GCCTTGACATTGTCGATCGTGTCAGAGGACTCGACTTCAAGAGTGATGGTTTTGCCGGTA 168986 Query 137389 AATGTTTTTACGAATATTTGCATA 137412 | || || ||||| || |||||| Sbjct 168987 AGAGTCTTGACGAAAATCTGCATA 169010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488539242802800