Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014-
10-24] 779 sequences; 17,256,624 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq156 91.5 2e-13
>seq156
Length=42092
Score = 91.5 bits (100), Expect = 2e-13
Identities = 196/287 (68%), Gaps = 6/287 (2%)
Strand=Plus/Minus
Query 147217 TCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTT--GTCCCGCAGTCCA 147274
||||| |||| || |||||||| || | |||| |||||| ||| ||| ||
Sbjct 33677 TCGATCACCCTTTGCAATTGGTCCACTCCTTTGCCCTTGTAGTTACCGTCG-GCA-TCAG 33620
Query 147275 CGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCT 147334
|||| ||| ||||| || ||||||||||| ||||| || || |||||||| || |
Sbjct 33619 TGTACTCGGCGCCAAAATGTCTCCACTGGAACCCGTATACAGGTCCCAGGTCACCTTCCC 33560
Query 147335 TTCTGTGCGAGAAGCCCG-CCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATG 147393
||||||| | ||||||| || || || ||||| | |||| | ||||||||
Sbjct 33559 TTCTGTG-GCCAAGCCCGACCTTCTCCAGGAACTCTTTGTTTCCGTTACCATCCCAGATT 33501
Query 147394 CCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGC 147453
|| || |||| | |||||| |||| | ||| || |||| | |||||| | |||
Sbjct 33500 CCTACACCCTGGCTAGAGAGCACCTTGGCGTCGGTACAGCCAGAAACGAACCATAAAAGC 33441
Query 147454 TCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500
|| | | ||| || | | ||||| | ||||| ||||| || ||
Sbjct 33440 TCAGCAATAACACCGCGCAGGAAGACGCGTTTGGTCGTCAGAAGAGG 33394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583482318285600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |