Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014- 10-24] 779 sequences; 17,256,624 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq156 91.5 2e-13 >seq156 Length=42092 Score = 91.5 bits (100), Expect = 2e-13 Identities = 196/287 (68%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 147217 TCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTT--GTCCCGCAGTCCA 147274 ||||| |||| || |||||||| || | |||| |||||| ||| ||| || Sbjct 33677 TCGATCACCCTTTGCAATTGGTCCACTCCTTTGCCCTTGTAGTTACCGTCG-GCA-TCAG 33620 Query 147275 CGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCT 147334 |||| ||| ||||| || ||||||||||| ||||| || || |||||||| || | Sbjct 33619 TGTACTCGGCGCCAAAATGTCTCCACTGGAACCCGTATACAGGTCCCAGGTCACCTTCCC 33560 Query 147335 TTCTGTGCGAGAAGCCCG-CCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATG 147393 ||||||| | ||||||| || || || ||||| | |||| | |||||||| Sbjct 33559 TTCTGTG-GCCAAGCCCGACCTTCTCCAGGAACTCTTTGTTTCCGTTACCATCCCAGATT 33501 Query 147394 CCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGC 147453 || || |||| | |||||| |||| | ||| || |||| | |||||| | ||| Sbjct 33500 CCTACACCCTGGCTAGAGAGCACCTTGGCGTCGGTACAGCCAGAAACGAACCATAAAAGC 33441 Query 147454 TCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500 || | | ||| || | | ||||| | ||||| ||||| || || Sbjct 33440 TCAGCAATAACACCGCGCAGGAAGACGCGTTTGGTCGTCAGAAGAGG 33394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583482318285600