Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014- 10-24] 779 sequences; 17,256,624 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq6 143 3e-29 >seq6 Length=242052 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| ||| ||||| ||||| || || ||||| |||||||| |||||||||||| | Sbjct 169293 CCACCTCGGAGACGCAAGACGAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAA 169352 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || || || || || || ||||| || |||||||| || || || Sbjct 169353 AGAGTTCGGCCGTCTTCAAGTTGCTTTCCGGCGAAAATTAATCGCTGCTGGTCAGGAGGA 169412 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || ||||| || ||||| ||| | ||||| || || || || Sbjct 169413 ATACCTTCCTTGTCCTGAATCTTCGCCTTGACATTGTCGATGGTGTCAGAGGACTCAACC 169472 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| |||||||| ||||| | ||| || |||||||| ||||| Sbjct 169473 TCAAGAGTGATGGTTTTGCCGGTAAGAGTCTTGACGAAAATCTGCAT 169519 Score = 109 bits (120), Expect = 6e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || || || || ||||| || |||||||||||||||||| | Sbjct 168496 CCACCACGGAGACGGAGGACAAGATGAAGAGTGGACTCTTTTTGAATGTTGTAGTCGGAA 168555 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || || || || || || |||||||| | || ||||||||||| || Sbjct 168556 AGGGTACGACCATCCTCTAGTTGCTTTCCGGCAAAAATGAGTCGTTGCTGATCGGGGGGG 168615 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || || ||||| ||| | ||| ||| ||||| || Sbjct 168616 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATTGTATCGCTAGATTCGACC 168675 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 || |||||||| || ||||| || Sbjct 168676 TCAAGAGTAATTGTCTTACCCGT 168698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505393478683080