Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014- 10-24] 779 sequences; 17,256,624 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq258 105 9e-18 >seq258 Length=65905 Score = 105 bits (116), Expect = 9e-18 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 39638 CCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTT 39697 |||||||| ||||| || || ||||| || ||||| ||||||||||| | || | ||| Sbjct 13626 CCCTCATCCCTACTGATCAACTCGTTTGAGAATGTCAGTCCAGGCATCAATCCCCTCTTC 13685 Query 39698 TTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAAT 39757 || | ||| || || |||||||| || ||||||||||| |||||||| || |||||| Sbjct 13686 TTCAACCAGAAGATAGCAGCAAAGGACCCAGAAAAGAAAATGCCTTCCACGCATGCAAAA 13745 Query 39758 GCAACAAGTCT 39768 || || || || Sbjct 13746 GCCACCAGCCT 13756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686902111225560