Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014- 10-24] 779 sequences; 17,256,624 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq6 114 4e-20 >seq6 Length=242052 Score = 114 bits (126), Expect = 4e-20 Identities = 131/175 (75%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 443700 TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTT 443759 |||| |||||||| ||||||| |||| |||||||| | || || || |||| Sbjct 183683 TTCGGTGAGCGACTCATCGCTTTCGCTGCCGTCGAAGGTATCTTCTTCTCTGGTT-CTTT 183741 Query 443760 AGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGA 443819 ||||||||||||||| | || ||||| || || |||| ||||| ||||| |||||| Sbjct 183742 CGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGTCTCACCTTCTCTAACGA 183801 Query 443820 ACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACC 443874 || ||| ||| ||||||||| | || |||||| |||||||| |||| |||| Sbjct 183802 GCTCATCTCTCGTGACGAGGGTCTCCACACCGACTTTGCCTGTCTCCTCTTCACC 183856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588320146917655