Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014- 10-24] 779 sequences; 17,256,624 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq156 100 2e-16 >seq156 Length=42092 Score = 100 bits (110), Expect = 2e-16 Identities = 204/298 (68%), Gaps = 4/298 (1%) Strand=Plus/Minus Query 30116 TTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCC 30175 || |||||||| || | | ||| || || ||||| || || || ||||| ||| Sbjct 33734 TTTGGGTTCCAAGCCGATAAGATAATCCGTCTGTCAGTCGGATTATTTTTGATGGTGTCG 33675 Query 30176 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG-TCCGTGTA 30234 | | |||||| || ||||| || | ||| ||||| | || || || ||||| Sbjct 33674 ATCACCCTTTGCAATTGGTCCACTCCTTTGCCCTTGTAGT-TACCGTCGGCATCAGTGTA 33616 Query 30235 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30294 ||| || || ||||| ||||||||||||||||| || ||||||||||| || || || Sbjct 33615 CTCGGCGCCAAAATGTCTCCACTGGAACCCGTATACAGGTCCCAGGTCACCTTCCCTTCT 33556 Query 30295 GTGCTCGAAGCCC-CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA 30353 ||| | |||||| ||| |||| || ||| || ||||| | |||||||| || Sbjct 33555 GTG-GCCAAGCCCGACCTTCTCCAGGAACTCTTTGTTTCCGTTACCATCCCAGATTCCTA 33497 Query 30354 CCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 30411 | |||| ||||||| | |||| || || | || |||||||| | ||||| Sbjct 33496 CACCCTGGCTAGAGAGCACCTTGGCGTCGGTACAGCCAGAAACGAACCATAAAAGCTC 33439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406306542463668