Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014-
10-24] 779 sequences; 17,256,624 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq156 100 2e-16
>seq156
Length=42092
Score = 100 bits (110), Expect = 2e-16
Identities = 204/298 (68%), Gaps = 4/298 (1%)
Strand=Plus/Minus
Query 30116 TTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCC 30175
|| |||||||| || | | ||| || || ||||| || || || ||||| |||
Sbjct 33734 TTTGGGTTCCAAGCCGATAAGATAATCCGTCTGTCAGTCGGATTATTTTTGATGGTGTCG 33675
Query 30176 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG-TCCGTGTA 30234
| | |||||| || ||||| || | ||| ||||| | || || || |||||
Sbjct 33674 ATCACCCTTTGCAATTGGTCCACTCCTTTGCCCTTGTAGT-TACCGTCGGCATCAGTGTA 33616
Query 30235 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30294
||| || || ||||| ||||||||||||||||| || ||||||||||| || || ||
Sbjct 33615 CTCGGCGCCAAAATGTCTCCACTGGAACCCGTATACAGGTCCCAGGTCACCTTCCCTTCT 33556
Query 30295 GTGCTCGAAGCCC-CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA 30353
||| | |||||| ||| |||| || ||| || ||||| | |||||||| ||
Sbjct 33555 GTG-GCCAAGCCCGACCTTCTCCAGGAACTCTTTGTTTCCGTTACCATCCCAGATTCCTA 33497
Query 30354 CCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 30411
| |||| ||||||| | |||| || || | || |||||||| | |||||
Sbjct 33496 CACCCTGGCTAGAGAGCACCTTGGCGTCGGTACAGCCAGAAACGAACCATAAAAGCTC 33439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406306542463668
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |