Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014-
10-24] 779 sequences; 17,256,624 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq6 93.3 3e-14
>seq6
Length=242052
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||| ||||| || || |||||||| || ||| || || |||| || || | |
Sbjct 169519 ATGCAGATTTTCGTCAAGACTCTTACCGGCAAAACCATCACTCTTGAGGTTGAGTCCTCT 169460
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || ||||| ||||| || || ||||| |||||| |||| || |
Sbjct 169459 GACACCATCGACAAT--GTCAAGGCGAAGATTCAGGACAAGGAAGGTATTCCTCCTGACC 169402
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
|||| || |||||||| |||||||| ||| | || |||| || | | ||||| ||||
Sbjct 169401 AGCAGCGATTAATTTTCGCCGGAAAGCAACTTGAAGACGGCCGAACTCTTTCCGACTACA 169342
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| ||| ||| | ||| | || |||||| | || || ||
Sbjct 169341 ACATCCAAAAGGAGTCCACCCTCCATCTCGTCTTGCGTCTCCGAGGTGG 169293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355859021420133
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |