Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014-
10-24] 779 sequences; 17,256,624 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq95 100 4e-16
>seq95
Length=57217
Score = 100 bits (110), Expect = 4e-16
Identities = 287/439 (65%), Gaps = 2/439 (0%)
Strand=Plus/Minus
Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984
|||||||| ||||| | || || | | ||||| || ||| || ||||| | | |
Sbjct 51026 TCAAATTCTTCTCCGTATACGTCGGCAAGCCCAGGACACTCAGCGGGACACATAAGGGTC 50967
Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044
||||| ||||| | || || ||||| || ||||| || ||||| || || ||
Sbjct 50966 CAGTCCCCATCGGATTCGACACGCTTCATGAAAAGATCGGGGATCCAGAGGGCGTAGAAA 50907
Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTT-TTAAGATCGAGAAACTCCAT 78103
||||| || | || || || || || ||||| ||||| || | || || |
Sbjct 50906 AGATCACGAGCTCGTACCTCCTCCTTACCATGGTTCTTCCTTAAG-TCAATGAAATCAAA 50848
Query 78104 AATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCC 78163
| ||||| ||||| || || ||||| || || | | ||||| || || || || ||
Sbjct 50847 TACATCAGCGTGCCAGGGCTCAAGATAGATGGCGAAGGCACCAGGACGCTTGTTGCCACC 50788
Query 78164 CTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGA 78223
|| || | |||| || ||| | |||| ||| | ||| ||||| |||||||||||
Sbjct 50787 TTGGTCAACGTATCGAGCAGTGGCGTCATAAGCTCGGAGCATAGGAATGATACCGTTAGA 50728
Query 78224 TGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCC 78283
|| || || || | ||| || || | || || ||||| |||| | ||
Sbjct 50727 GTAACCGTTGGTACCGGCAATGTAGGAGCCCTTCGCACGGATATTGTGAATGTGAAGACC 50668
Query 78284 TATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTC 78343
|| || || || |||| || || |||| ||| || | |||||||||||||| ||
Sbjct 50667 AATACCACCAGCGGTCTTGGAGATCTGAGCACAAGTCTTGAGAGTATCGTAGATACCATC 50608
Query 78344 TATACTGTCATCCATCATG 78362
|| |||||| |||||
Sbjct 50607 AATGGAATCATCCTTCATG 50589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694662035662560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |