Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157
45.1_202017-07-07] 841 sequences; 18,436,157 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq168 131 2e-25
>seq168
Length=163348
Score = 131 bits (144), Expect = 2e-25
Identities = 181/253 (72%), Gaps = 3/253 (1%)
Strand=Plus/Plus
Query 42064 ACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAG 42123
||| || || ||| ||| |||||||| |||| | || | ||||| || || || ||
Sbjct 63430 ACAGGCAAAGTCGGTGTGGAGACCCTCGTCTCGAGAGATGAGCTCGTTAGAGAAGGTAAG 63489
Query 42124 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAA 42183
|| ||||| || || ||||| |||||||| || || ||||| || || ||||| |||||
Sbjct 63490 ACCAGGCATGAGACCTCGCTTCTTAAGCCAGAAGATGGACGCGAAAGAACCAGAGAAGAA 63549
Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT---GTCATG 42240
||| || || || || ||||| ||||| |||| ||| || ||| | | ||||
Sbjct 63550 GATACCCTCCACGGCAGCAAAAGCAATGAGTCGCTCGCCGAAACAAGATTTTTGGTCAGA 63609
Query 42241 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300
||||| ||||||| |||||||||||| | |||||| || || || || || |
Sbjct 63610 GATCCATCGAAGAGCCCAGTCGGCCTTCTTTCGGATACAAGGAATGGTGTCCATAGCGTC 63669
Query 42301 AAAGAGATAGTTT 42313
|||||| |||||
Sbjct 63670 AAAGAGGAAGTTT 63682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671132144649160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |