Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157 45.1_202017-07-07] 841 sequences; 18,436,157 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq168 138 1e-27 >seq168 Length=163348 Score = 138 bits (152), Expect = 1e-27 Identities = 151/199 (76%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTC 94868 ||||| |||||||| | ||| || ||| | || || || |||||| || ||||| | Sbjct 78347 GTAGACTCCTTTTGGATGTTGTAGTCGG--AAAGAGTACGACCATCCTCAAGTTGTTTAC 78290 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 | |||| || |||| ||||||||| |||||||||||||| ||||| | ||| || |||| Sbjct 78289 CAGCAAAAATCAATCGTTGCTGATCAGGAGGAATACCTTCCTTGTCCTGAATCTTCGCCT 78230 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 | ||| | ||| |||||||| ||||| |||| ||||| || ||||| || | || Sbjct 78229 TAACGTTGTCGATAGTGTCAGACGACTCGACTTCAAGAGTGATAGTCTTTCCGGTCAAAG 78170 Query 94989 TTTTCACAAAGATCTGCAT 95007 | || |||||||||||||| Sbjct 78169 TCTTGACAAAGATCTGCAT 78151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448286487338760