Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157
45.1_202017-07-07] 841 sequences; 18,436,157 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq434 233 5e-56
seq32 89.7 1e-12
>seq434
Length=110320
Score = 233 bits (258), Expect = 5e-56
Identities = 651/996 (65%), Gaps = 12/996 (1%)
Strand=Plus/Minus
Query 363573 CAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGA 363632
||| ||||| |||| || || ||||| || ||||| || | |||||||| ||
Sbjct 14841 CAACGCTGGTACTCCCCGACCCCAAATGTCATCATGCTTCCTCGTGGCCATGAAGGATGA 14782
Query 363633 TTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGG 363692
||||| || ||||||| || || || |||| ||||||| || ||||||| ||| ||
Sbjct 14781 CTCCATTGATGGTATCTACGATACTCTCAAGACCTGTGCTCAGATCTCCAAGACTGCCGG 14722
Query 363693 CGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCACAGG 363752
|| |||||| | || |||||| | ||||| || | |||||| ||| ||
Sbjct 14721 TGGTATTGGTCTTCACATTCACAATATCCGTGCGAAGGGCTCCTACATTGCCGGTACCAA 14662
Query 363753 GGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGT 363812
|| ||||| || || | |||| ||||| || | | ||| || || | |||||
Sbjct 14661 TGGTTACTCCAACGGCATCATTCCTATGCTCCGAGCTTACGACGCCACAGCTCGATACGT 14602
Query 363813 CGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGC 363872
|| || ||||| ||||| || || || || || ||||| |||||| || ||
Sbjct 14601 TGATCAAGGTGGTAACAAGCGTCCTGGTGCCTTCGCCATCTATCTTGAGCCTTGGCACGC 14542
Query 363873 CGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACG 363932
||| | ||||| || |||| | |||| ||| || || ||||| | || || ||
Sbjct 14541 TGATGTATTTGACTTCATTGACTTAAGGAAGAACCATGGTAAGGAGGAGGTACGAGCTCG 14482
Query 363933 TGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAA 363992
|||||| ||||| || || ||| | || || | ||| |||||||| || || | | |
Sbjct 14481 TGATCTTTTCTACGCCCTCTGGATCTCCGATCTTTTCATGAAGCGTGTCGAATCCGATGG 14422
Query 363993 GAATTGGTCACTCTTTTG---CCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGA 364049
| ||||| |||||| || ||| | ||| || || || ||| |||| || | || ||
Sbjct 14421 GGATTGG--ACTCTTATGTGTCCCGC-CGAGTGCCCTGGACTTGCCGACGTTTACGGCGA 14365
Query 364050 CGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCC 364109
|| | || || || || | || || | |||| |||| | || || ||
Sbjct 14364 AGAATTTGAAAAGCTTTATGAGAGCTACGAGAGGCAGGGCAAGGGAAGGAAAACTATCAA 14305
Query 364110 CGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATAT 364169
|| |||||||| ||||| |||||| | || | || | ||||| || || |||||
Sbjct 14304 AGCCCAGAAGCTTTGGTTCGCCATCCTCGAGGCTCAAACCGAGACTGGTGTCCCTTATAT 14245
Query 364170 GTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCA 364229
| ||||| ||| | |||| |||||||||||| ||||||||||||| || |
Sbjct 14244 CTGCTACAAGGATGCTGCCAACTCCAAGTCCAACCAAAAGCACCTTGGTACCATCAAATC 14185
Query 364230 GAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAA 364289
|| ||||| ||||| || || || || || | |||| || || ||| || |||||
Sbjct 14184 CAGTAACCTCTGTACTGAAATCATGGAGTATTCTTCTCCTGATGAAGTTGCTGTCTGTAA 14125
Query 364290 CCTTGCGTCGATCGCGCTTCCGGCGTTTGTA------AAAGATGGTACTTTTGACCACCA 364343
||||| || | || ||||| || || ||| || | | | |||| | |
Sbjct 14124 TCTTGCTTCTCTTGCTCTTCCTGCCTTCGTAGACCTTGAACGTCGCGTCTATGACTTCAA 14065
Query 364344 GCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAA 364403
| || | || | ||| | || ||| || || || | || ||| | ||
Sbjct 14064 AAAGCTGCACGAGATTACCAAGGTTGTTACAAAGAACCTTGATACTGTAATCACCCGTAA 14005
Query 364404 TTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGG 364463
|| |||||| | ||||||||| || || ||||| ||||| || ||||||||||
Sbjct 14004 CTACTATCCAGTGCCTGAAGCCCGCAACTCCAACATGCGCCATCGACCTGTTGGTCTTGG 13945
Query 364464 TGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGC 364523
||| ||||| || || |||| ||| ||| || ||| | || || || |||| ||
Sbjct 13944 TGTCCAGGGTCTTGCCGACGCTTTCATGGCCCTTCGCATGCCGTTCGACTCCGCTGAGGC 13885
Query 364524 TCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTA 364559
| | | || |||| ||||||| || || || ||
Sbjct 13884 TAGGGAACTCAATATCCAGATCTTCGAGACGATATA 13849
>seq32
Length=49190
Score = 89.7 bits (98), Expect = 1e-12
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 22513 GTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCA 22572
|| |||||||||||||||||||| | ||| ||||||||| ||| |||| || | |
Sbjct 12545 GTGGAAGGCATTTTCTTTTCTGGGTCTTTTGCTGCAATCTTCTGGTTAAAGAAGAGAGGG 12604
Query 22573 ATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATAC 22631
| ||||| || || || |||||||| ||||| || ||| | |||||||| | |||||
Sbjct 12605 TTGATGCCTGGACTGACATTTTCAAACGAGTTGATCAGCAGGGATGAGGGGATGCATAC 12663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303339555957662
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |