Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157 45.1_202017-07-07] 841 sequences; 18,436,157 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq312 86.0 6e-12 >seq312 Length=129912 Score = 86.0 bits (94), Expect = 6e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 20482 CAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAA 20541 || |||||| | || | | | ||||||| | || || || |||| | || ||||| Sbjct 106434 CAGTTGGTCGACTCCTTTGTCCTTATAGTCTCCGTCGGCATCAGTGTACTCGGCACCAAA 106375 Query 20542 GTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCC 20601 || ||||||||||| ||||| |||||||||||||| || ||||||||||| | || || Sbjct 106374 ATGTCTCCACTGGAACCCGTACACAGGTCCCAAATCACCTTCCCTTCTGTGGCCGAGCCC 106315 Query 20602 GCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCCTGTTCTTGA 20661 | | ||||||| || || || || |||||| ||| || || || || Sbjct 106314 GACCTTCTCCAGGAATTCTTTGCTTCCGTTACCGTCCCAGATCCCTACGCCCTGACTAGA 106255 Query 20662 AAGCTCCCTGGAGTCAGTAC 20681 ||| || ||| ||| |||| Sbjct 106254 GAGCACCTTGGCGTCGGTAC 106235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441368160068440