Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157
45.1_202017-07-07] 841 sequences; 18,436,157 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq434 165 1e-35
seq168 122 1e-22
seq140 105 8e-18
>seq434
Length=110320
Score = 165 bits (182), Expect = 1e-35
Identities = 710/1113 (64%), Gaps = 21/1113 (2%)
Strand=Plus/Plus
Query 114103 CCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGG 114162
|||||| || |||| |||||||| | ||| || || || || | | || || |
Sbjct 13743 CCACATGTCGTACTGAAGGATACCCTTAGAGATGGGAGAACCTTCGTAAGATTCATAGGT 13802
Query 114163 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAA 114222
|| |||| || | |||| | |||||| || || ||||| || || ||||| ||
Sbjct 13803 ACCAAACTCCTCGGCAAGTTCGCATGACGCCTCAAGCGCCGCGTGGTATATCGTCTCGAA 13862
Query 114223 AATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAA 114282
|| | ||| | | || | ||||| |||| || |||| | || || ||
Sbjct 13863 GATCTGGATATTGAGTTCCCTAGCCTCAGCGGAGTCGAACGGCATGCGAAGGGCCATGAA 13922
Query 114283 TACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCG 114342
| || || ||||| |||||||| || |||| || ||||| | ||| || || || ||
Sbjct 13923 AGCGTCGGCAAGACCCTGGACACCAAGACCAACAGGTCGATGGCGCATGTTGGAGTTGCG 13982
Query 114343 AGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC 114402
|| ||| ||||| | || | ||| || ||| || || || || |||||
Sbjct 13983 GGCTTCAGGCACTGGATAGTAGTTACGGGTGATTACAGTATCAAGGTTCTTTGTAACAAC 14042
Query 114403 CTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTT 114462
||| || || || || ||||||| | | ||| | |||| || | || |
Sbjct 14043 CTTGGTAATCTCGTGCAGCTTTTTGAAGTCATAGACGCGACGTTCAAGGTCTACGAAGGC 14102
Query 114463 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTAT 114522
|||||| || | || || |||||||| |||| ||||| | || ||||| ||
Sbjct 14103 AGGAAGAGCAAGAGAAGCAAGATTACAGACAGCAACTTCATCAGGAGAAGAATACTCCAT 14162
Query 114523 AATTTCCGTACACAAATT--TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTT 114580
||||| ||||| | || || | | | ||||| || | || |||||| || |||||
Sbjct 14163 GATTTCAGTACAGAGGTTACTGGATT--TGATGGTACCAAGGTGCTTTTGGTTGGACTTG 14220
Query 114581 GTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGA 114640
| ||| ||||||||||| || || || || ||||| ||||| | || |||
Sbjct 14221 GAGTTGGCAGCATCCTTGTAGCAGATATAAGGGACACCAGTCTCGGTTTGAGCCTCGAGG 14280
Query 114641 ATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGG-CGTTGGCTCGCCCCTCCTCCTCGT 114698
|| || ||| | | || | |||| | ||| | || || |||| |||| ||||
Sbjct 14281 ATGGCGAACCAAAGCTTCTG-GGCTTTGATAGTTTTCCTTCCCTTGCCCTGCCTC-TCGT 14338
Query 114699 ACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTAT 114758
| | || || |||||| ||||| || | || | || || || ||
Sbjct 14339 AGCTCTCATAAAGCTTTTCAAATTCTTCGCCGTAAACGTCGGCAAGTCCAGGGCACTCGG 14398
Query 114759 CTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGA 114818
| || || | |||| ||| | ||| | || |||||||||||||| || || | ||
Sbjct 14399 CGGGACACATAAGAGTCCAATCCCCATCGGATTCGACACGCTTCATGAAAAGATCGGAGA 14458
Query 114819 TCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCA 114878
||||||| || |||| ||||| ||| || | || || | || || || | |
Sbjct 14459 TCCAGAGGGCGTAGAAAAGATCACGAGCTCGTACCTCCTCCTTACCATGGTTCTTCCTTA 14518
Query 114879 ACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCT 114938
| || | ||||| | | ||| |||||||| || || || || | |||| | ||
Sbjct 14519 AGTCAATGAAGTCAAATACATCAGCGTGCCAAGGCTCAAGATAGATGGCGAAGGCACC-- 14576
Query 114939 TACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCA 114992
| |||| |||| | || | || || | |||||||| | | | || ||||
Sbjct 14577 -AGGACGCTTGTTACCACCTTGATCAACGTATCGAGCTGTGGCGTCGTAAGCTCGGAGCA 14635
Query 114993 TTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCT 115050
| |||||||| || | || | ||||| || || ||| | ||| | | | || |
Sbjct 14636 TAGGAATGATGCCGTTGGAGTAACCATTGGTACCGGCAATGTAGGAGCCCT--TCGCACG 14693
Query 115051 GACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGT 115110
|| || || ||||| | ||||||||| || || ||| ||||| || || || | |
Sbjct 14694 GATATTGTGAATGTGAAGACCAATACCACCGGCAGTCTTGGAGATCTGAGCACAGGTCTT 14753
Query 115111 GAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGA 115170
|||| | ||||||| || || || |||||| |||| | || | |||||||| ||
Sbjct 14754 GAGAGTATCGTAGATACCATCAATGGAGTCATCCTTCATGGCCACGAGGAAGCATGATGA 14813
Query 115171 CATTTGTGGCCTTGGTGTACCAGCGTTGAAGAG 115203
|||||| || | || |||||||||||||| ||
Sbjct 14814 CATTTGGGGTCGGGGAGTACCAGCGTTGAAAAG 14846
>seq168
Length=163348
Score = 122 bits (134), Expect = 1e-22
Identities = 121/154 (79%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
|||||| || ||||||||||||||| || |||||||| || || |||||| || ||
Sbjct 63433 GGCAAAGTCGGTGTGGAGACCCTCGTCTCGAGAGATGAGCTCGTTAGAGAAGGTAAGACC 63492
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCG-CACAAAATGAACCCGAGAAGAAGA 126164
||||||||||| |||||||| | |||||| || | | | ||| ||||| ||||||||||
Sbjct 63493 AGGCATGAGACCTCGCTTCTTAAGCCAGAAGATGGACGCGAAA-GAACCAGAGAAGAAGA 63551
Query 126165 TTCCCTCCACACACGCGAACGCAAAGAGACGCTC 126198
| |||||||| || || |||| ||| |||||
Sbjct 63552 TACCCTCCACGGCAGCAAAAGCAATGAGTCGCTC 63585
>seq140
Length=11006
Score = 105 bits (116), Expect = 8e-18
Identities = 285/428 (67%), Gaps = 6/428 (1%)
Strand=Plus/Plus
Query 171727 ACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAA 171786
||| || || ||||| || | || || | | |||||||||| || ||||| | |
Sbjct 3737 ACCAGTACCGATACCATCTGCACCATTGATCAATACCATTGGAACGGTGGGCATGAAATA 3796
Query 171787 GTCTGGTTCAAT-CGCACGCCCATCATCATCCAAATAGTTGAGCACGGGGTCGTCCCTCG 171845
||||||||||| |||| || ||| || |||| |||||||||| ||| || |
Sbjct 3797 ATCTGGTTCAATGCGCATACC-ATCCTCGACCAAGTAGTTGAGCAACCCGTCATCTGCAG 3855
Query 171846 GATCAAAGATTTTACGAG-CATCCTTGGTGAGTTTTGTGAAGATGTACCTCGTTTGAGAC 171904
| | |||||| |||| ||||| ||| || ||||||||||| || | | ||
Sbjct 3856 GGTGGAAGATTGCCCGAGTCATCCGTGGA-AGGTTTGTGAAGATATAACGAGCAGAAGCT 3914
Query 171905 GCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTGATA 171964
|| ||||| ||||| ||||| || |||||||| || || || || ||||||||
Sbjct 3915 GCGTCTTTACCACCTGCAAGACGAGTACCAAATTGGCCGTTGGGATCCAGCAGATTGATG 3974
Query 171965 TTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCA 172024
||||| || | | ||| | || || |||||| || | | | |||||
Sbjct 3975 TTGTTACTGCCGACGAAGTTTTGTGCTAAACCGACAATGGTGGAAGTCAAACTGGCTTCA 4034
Query 172025 CCGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAA-CTGTGCCACCTTCATCTC 172083
|| || || || || | || |||| || || |||| ||| ||| || ||||| || ||
Sbjct 4035 CCATGGTGATATGCGGTTTTCTCCGAAACGTA-GCCGGCAAGCTGAGCGACCTTGATTTC 4093
Query 172084 ATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCC 172143
| ||||||| | ||| || || | | ||||||| ||| ||| ||||| ||
Sbjct 4094 TTTGGTGAGGTTTCGCTTGAAACAACCAAAGAGAACCTTTCGCTGACCAGGTTTGAGACC 4153
Query 172144 GTCGGCCA 172151
||||||||
Sbjct 4154 GTCGGCCA 4161
Score = 102 bits (112), Expect = 1e-16
Identities = 139/192 (72%), Gaps = 4/192 (2%)
Strand=Plus/Plus
Query 172777 AGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACC 172836
||| ||||| ||||| | || || | ||||||||| || || || | |||||| ||
Sbjct 4887 AGCTTCGCGAACATTGAGAAGTTTACCCCTGAGAGGGAAAACGCCATACTCATCACGTCC 4946
Query 172837 AACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAG 172896
|| || | |||||||| ||| ||||| | || || ||||| || ||||||| ||||||
Sbjct 4947 GACAACTGCAAGACCAGAAACGGCGAGAGCTTTGGCAGAATCTCCTTCCGTCAGGATGAG 5006
Query 172897 CGTACACTT--TCCAGATTGTGCCGTCCCCGCCTTGTTCGCATCGTCCAACTTGGGAATA 172954
|| || || | || || |||| || || ||||||||||| || | ||| ||||
Sbjct 5007 AGTGCAGTTCTTGGAGTTTCGGCCG--CCAGCATTGTTCGCATCTTCAAGCTTTACAATA 5064
Query 172955 CCAGTAATTTTG 172966
|||| |||| ||
Sbjct 5065 CCAGAAATTCTG 5076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597347320320280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |