Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157
45.1_202017-07-07] 841 sequences; 18,436,157 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq32 114 1e-20
>seq32
Length=49190
Score = 114 bits (126), Expect = 1e-20
Identities = 104/131 (79%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 18982 CCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttt 19041
||||| || || || ||||| || || |||||||| | |||||||||| ||||| ||
Sbjct 12654 CCCTCATCCCTGCTGATCAACTCGTTTGAAAATGTCAGTCCAGGCATCAACCCTCTCTTC 12595
Query 19042 tttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAA 19101
||||||||||| || | |||||| || ||||||||||| || ||||| || |||||||
Sbjct 12594 TTTAACCAGAAGATTGCAGCAAAAGACCCAGAAAAGAAAATGCCTTCCACGCATGCAAAA 12535
Query 19102 GCAACTAGTCT 19112
|| || |||||
Sbjct 12534 GCCACCAGTCT 12524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562102890831240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |