Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157
45.1_202017-07-07] 841 sequences; 18,436,157 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq16 93.3 3e-13
seq7 93.3 3e-13
>seq16
Length=55652
Score = 93.3 bits (102), Expect = 3e-13
Identities = 141/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 282611 ATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGG--TCATTAAAATCTC 282668
|| || || || ||||||| ||||| || | ||||| || || || ||||| | |
Sbjct 204 ATTACCTTGAAAGGCCAATGCTTCATGTCGGCCTGAAC--TTCGGCATCGTTAAACTTAC 261
Query 282669 TACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATT 282728
|| || || || || ||||| |||| ||| ||| ||||| | |||| |||||| |
Sbjct 262 GGCCGATCAACCGCTTAGCATCGAAAACAGTGTTGTAAGGATTCATTGCAACTTGATTCT 321
Query 282729 TGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGC 282788
| || ||||| || || || |||| | || | || | |||||||||||| ||||| |
Sbjct 322 TCGCGGCATCACCGATAAGTCGTTCAGAATCATTGAAAGCAACATATGATGGTGTTGTTC 381
Query 282789 GATTACCTTGATCATTCGC 282807
|||| || ||||| || ||
Sbjct 382 GATTGCCCTGATCGTTGGC 400
>seq7
Length=59247
Score = 93.3 bits (102), Expect = 3e-13
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192
||||| | ||||| | |||| |||||| |||||| | ||| |||| ||| | || |||
Sbjct 24067 GAATTCTGGTTCCACGCTATGGGTGGTCGAGAAGGTTTGATTGATACCGCTGTCAAGACT 24008
Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252
||||| ||||||||||| ||||||| | | ||||| | | || || | || |
Sbjct 24007 GCTGAGACTGGTTATATCCAAAGAAGATTGGTCAAAGCGATGGAGGACTTGAAGGTTGCT 23948
Query 435253 TATGATGGTACAGTGAGAAAT 435273
||||||||||| |||||||||
Sbjct 23947 TATGATGGTACTGTGAGAAAT 23927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740589110454066
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |