Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157
45.1_202017-07-07] 841 sequences; 18,436,157 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq168 149 1e-30
>seq168
Length=163348
Score = 149 bits (164), Expect = 1e-30
Identities = 159/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954
||| ||||| || |||||||| |||||||| |||||||||| | ||||| ||||||||
Sbjct 77853 GACGAGATGGAGGGTAGACTCCTTTTGGATATTGTAATCGGAAAGAGTTCGGCCATCTTC 77794
Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
|| ||| ||||||||||| || | ||||| || | | ||| || ||||| |||||
Sbjct 77793 AAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGATCAGGGGGGATACCCTCCTTGTCTTG 77734
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|| || |||||| | || | | | || || || || |||||||| ||||| |||||
Sbjct 77733 GATCTTGGCCTTGACATTGTCGATGGTATCAGAGCTTTCGACTTCAAGGGTAATGGTTTT 77674
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| ||||| || || ||||||| |||||
Sbjct 77673 GCCGGTGAGGGTTTTGACGAAGATTTGCAT 77644
Score = 109 bits (120), Expect = 1e-18
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| ||||| ||||| |||||||| |||||||||||||| |||| | ||| | |||||
Sbjct 78363 GAGAACAAGGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGACCATC 78304
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || ||| || || || || | | ||||| || | | || |||||||| ||
Sbjct 78303 CTCAAGTTGTTTACCAGCAAAAATCAATCGTTGCTGATCAGGAGGAATACCTTCCTTGTC 78244
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
||||| || || || | || | |||| || ||| ||||||||||| |||||
Sbjct 78243 CTGAATCTTCGCCTTAACGTTGTCGATAGTGTCAGACGACTCGACTTCAAGAGTGATAGT 78184
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || | |||||| || |||| ||||||
Sbjct 78183 CTTTCCGGTCAAAGTCTTGACAAAGATCTGCAT 78151
Score = 105 bits (116), Expect = 2e-17
Identities = 140/193 (73%), Gaps = 6/193 (3%)
Strand=Plus/Minus
Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954
||| ||||| || |||||||| |||||||| |||||||||| | ||||| ||||||||
Sbjct 78641 GACGAGATGGAGGGTAGACTCCTTTTGGATATTGTAATCGGAAAGAGTTCGGCCATCTTC 78582
Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
|| ||| ||||||||||| || | ||||| || | | ||| || ||||| |||||
Sbjct 78581 AAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGATCAGGGGGGATACCCTCCTTGTCTTG 78522
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTC---TCTACTTCAAGAGTAATAGT 152071
|| || ||||| | || | | | || ||| || ||||||||||| || ||
Sbjct 78521 GATCTTGGCCTTGACGTTGTCGATGGTATC---GCTCGATTCGACTTCAAGAGTGATTGT 78465
Query 152072 TTTGCCCGTGAGA 152084
|| ||||| |||
Sbjct 78464 CTTACCCGTAAGA 78452
Score = 100 bits (110), Expect = 7e-16
Identities = 129/178 (72%), Gaps = 0/178 (0%)
Strand=Plus/Minus
Query 151927 TGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCT 151986
|||| |||| | ||| || |||||||| || || || || ||||| | | ||||
Sbjct 77542 TGTAGTCGGAGAGAGTCCTGCCATCTTCAAGCTGCTTACCAGCAAAGATCAATCGTTGCT 77483
Query 151987 GGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTG 152046
|||| | | ||| || ||||| ||||| || || |||||| | || | | |||| |
Sbjct 77482 GGTCAGGAGGGATACCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCGG 77423
Query 152047 AACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||| ||||||||||| ||||| || || ||||||||||| ||||| | |||||
Sbjct 77422 AAGACTCCACTTCAAGAGTGATAGTCTTACCGGTGAGAGTCTTGACGAAAATTTGCAT 77365
Score = 95.1 bits (104), Expect = 3e-14
Identities = 130/180 (72%), Gaps = 4/180 (2%)
Strand=Plus/Minus
Query 151927 TGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTG 151984
||||||| | ||||||| ||||| || || ||||| ||||||||||| | | ||
Sbjct 78049 TGTAATCAGACAAAGTTCGACCATCCTCCAGTTGCTTT--CCGGCGAAGATCAATCGTTG 77992
Query 151985 CTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTC 152044
||||| | | ||| || ||||| || ||||| || |||||| | || | | ||||
Sbjct 77991 TTGGTCAGGAGGGATACCCTCCTTGTCCTGAATCTTCGCCTTGACATTGTCGATGGTGTC 77932
Query 152045 TGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || |||||||| ||||| || || || |||||||| ||||| | ||||||
Sbjct 77931 AGAGGATTCAACCTCAAGAGTGATAGTCTTTCCGGTAAGAGTCTTGACGAAAATCTGCAT 77872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153808367220311
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |