Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157 55.1_202017-07-07] 669 sequences; 18,368,897 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq334 107 2e-18 >seq334 Length=290900 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| ||||||| | || ||||||||||||||| ||| ||| | | Sbjct 77784 ATGCAAATCTTCGTCAAAACCCTCACCGGCAAAACCATTACCCTTGAAGTCGAAAGCTCT 77843 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | || ||||| || || || || || ||| | ||| ||||| Sbjct 77844 GATACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCCCCTGATCAG 77903 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| |||| ||||| || || |||||| | |||||| | |||| | ||||||||||| Sbjct 77904 CAACGACTCATCTTCGCCGGAAAACAACTTGAAGATGGCCGAACTCTTTCCGATTACAAT 77963 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || |||||||| ||||| || || | || || || | ||||| || Sbjct 77964 ATCCAAAAGGAGTCTACCCTCCATCTCGTCTTGCGTCTCCGAGGTGG 78010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410793450593966