Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157
55.1_202017-07-07] 669 sequences; 18,368,897 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq334 82.4 6e-11
>seq334
Length=290900
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || ||||||||||| ||||||||||||| | || | ||||| | ||||
Sbjct 78493 TGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGACCATCCTCAAGTTGT 78434
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
|| || ||| |||| | || || || || ||| | || || ||||| ||| | |
Sbjct 78433 TTACCAGCAAAAATCAATCGTTGCTGATCAGGAGGAATACCTTCCTTGTCCTGAATCTTC 78374
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||| || | | | | |||||| | ||| ||| | ||||| || |||||||||
Sbjct 78373 GCCTTAACGTTGTCGATAGTGTCAGACGACTCGACTTCAAGAGTGATAGTCTTTCCGGTC 78314
Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935
| || |||||||| ||||||||
Sbjct 78313 AAAGTCTTGACAAAGATCTGCAT 78291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405084697140310
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |