Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157 55.1_202017-07-07] 669 sequences; 18,368,897 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq323 86.0 6e-12 >seq323 Length=137615 Score = 86.0 bits (94), Expect = 6e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 20482 CAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAA 20541 || |||||| | || | | | ||||||| | || || || |||| | || ||||| Sbjct 109857 CAGTTGGTCGACTCCTTTGTCCTTATAGTCTCCGTCGGCATCAGTGTACTCGGCACCAAA 109798 Query 20542 GTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCC 20601 || ||||||||||| ||||| |||||||||||||| || ||||||||||| | || || Sbjct 109797 ATGTCTCCACTGGAACCCGTACACAGGTCCCAAATCACCTTCCCTTCTGTGGCCGAGCCC 109738 Query 20602 GCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCCTGTTCTTGA 20661 | | ||||||| || || || || |||||| ||| || || || || Sbjct 109737 GACCTTCTCCAGGAATTCTTTGCTTCCGTTACCGTCCCAGATCCCTACGCCCTGACTAGA 109678 Query 20662 AAGCTCCCTGGAGTCAGTAC 20681 ||| || ||| ||| |||| Sbjct 109677 GAGCACCTTGGCGTCGGTAC 109658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441369109019960