Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157
55.1_202017-07-07] 669 sequences; 18,368,897 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq334 93.3 5e-14
>seq334
Length=290900
Score = 93.3 bits (102), Expect = 5e-14
Identities = 147/208 (71%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||| | |||||| || | ||| | || ||||||||| ||||||||||| |
Sbjct 78799 ACCACCTCGGAGACGCAAGACGAGATGGAGGGTAGACTCCTTTTGGATATTGTAATCGGA 78740
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||||| || | || || || || || || ||||| |||||||| ||||| || | ||
Sbjct 78739 AAGAGTTCGGCCATCTTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGATCAGGGGG 78680
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| | ||||||||| ||| || |||| ||| | | | || ||||||||||| |
Sbjct 78679 GATACCCTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTATCGCTCGATTCGA 78621
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAG 42187
| || | ||||| || || ||||| ||
Sbjct 78620 CTTCAAGAGTGATTGTCTTACCCGTAAG 78593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543208257382960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |