Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157 55.1_202017-07-07] 669 sequences; 18,368,897 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq490 199 4e-46 >seq490 Length=110099 Score = 199 bits (220), Expect = 4e-46 Identities = 479/725 (66%), Gaps = 0/725 (0%) Strand=Plus/Minus Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAG 93963 || |||||||| || || || || || ||||| || || ||||| || | | ||| Sbjct 14924 CTTTTCAACGCTGGTACTCCCCGACCCCAAATGTCATCATGCTTCCTCGTGGCCATGAAG 14865 Query 93964 GCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATAC 94023 | |||||||| || || | ||| | |||||| |||||| ||||| || Sbjct 14864 GATGACTCCATTGATGGTATCTACGATACTCTCAAGACCTGTGCTCAGATCTCCAAGACT 14805 Query 94024 GCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGT 94083 || || || || || | | ||| | | ||||| | ||| |||||||| |||| Sbjct 14804 GCCGGTGGTATTGGTCTTCACATTCACAATATCCGTGCGAAGGGCTCCTACATTGCCGGT 14745 Query 94084 ACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGC 94143 |||||||| |||||||||| || | ||||||||||| | | | || | | || || Sbjct 14744 ACCAATGGTTACTCCAACGGCATCATTCCTATGCTCCGAGCTTACGACGCCACAGCTCGA 14685 Query 94144 TACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGG 94203 ||||| || || |||||| | | | ||| | ||||| ||||||| ||||| ||| Sbjct 14684 TACGTTGATCAAGGTGGTAACAAGCGTCCTGGTGCCTTCGCCATCTATCTTGAGCCTTGG 14625 Query 94204 CACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGG 94263 ||||| || || | ||||| ||| | | |||||||| || || || || | Sbjct 14624 CACGCTGATGTATTTGACTTCATTGACTTAAGGAAGAACCATGGTAAGGAGGAGGTACGA 14565 Query 94264 GCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAA 94323 || | || || |||||||| |||||| | | || ||||| ||||| || ||||| Sbjct 14564 GCTCGTGATCTTTTCTACGCCCTCTGGATCTCCGATCTTTTCATGAAGCGTGTCGAATCC 14505 Query 94324 AACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGA 94383 | | |||| |||| | |||||| || || || ||||| ||||||||| || Sbjct 14504 GATGGGGATTGGACTCTTATGTGTCCCGCCGAGTGCCCTGGACTTGCCGACGTTTACGGC 14445 Query 94384 TCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTTATG 94443 |||||| | | |||| | ||||| ||||||||||| ||||| ||| Sbjct 14444 GAAGAATTTGAAAAGCTTTATGAGAGCTACGAGAGGCAGGGCAAGGGAAGGAAAACTATC 14385 Query 94444 GATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTAC 94503 | || |||||| ||| ||| | || | || ||||| ||| || || Sbjct 14384 AAAGCCCAGAAGCTTTGGTTCGCCATCCTCGAGGCTCAAACCGAGACTGGTGTCCCTTAT 14325 Query 94504 ATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAG 94563 |||| | |||||| ||| |||| ||||||||||||| ||||||| || ||||| Sbjct 14324 ATCTGCTACAAGGATGCTGCCAACTCCAAGTCCAACCAAAAGCACCTTGGTACCATCAAA 14265 Query 94564 AGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGT 94623 | || || || || || || | |||||| ||||||| || || ||||||| ||| Sbjct 14264 TCCAGTAACCTCTGTACTGAAATCATGGAGTATTCTTCTCCTGATGAAGTTGCTGTCTGT 14205 Query 94624 AACCT 94628 || || Sbjct 14204 AATCT 14200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494719062877240