Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157 55.1_202017-07-07] 669 sequences; 18,368,897 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq334 82.4 6e-11 >seq334 Length=290900 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| | || || |||||||||||| ||| ||| || Sbjct 77784 ATGCAAATCTTCGTCAAAACCCTCACCGGCAAAACCATTACCCTTGAAGTCGAAAGCTCT 77843 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || ||||| || ||| ||||| ||||| | ||| ||||| Sbjct 77844 GATACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCCCCTGATCAG 77903 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || |||| ||||| || || |||||| | |||||| |||| | ||||||| || Sbjct 77904 CAACGACTCATCTTCGCCGGAAAACAACTTGAAGATGGCCGAACTCTTTCCGATTACAAT 77963 Query 28734 ATTCAAAAAGAATCTACTCTGCA 28756 || ||||| || ||||| || || Sbjct 77964 ATCCAAAAGGAGTCTACCCTCCA 77986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425401331488551