Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157 55.1_202017-07-07] 669 sequences; 18,368,897 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq371 269 3e-67 seq334 221 2e-52 seq490 205 1e-47 seq167 172 7e-38 seq379 120 4e-22 seq646 113 6e-20 seq84 109 7e-19 seq40 104 3e-17 >seq371 Length=1054 Score = 269 bits (298), Expect = 3e-67 Identities = 655/996 (66%), Gaps = 66/996 (7%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||||||||| || ||| | | ||| || || | || ||||| || Sbjct 1 AAGATGAAGGAGACTGCTGAGGCTTACCTTGGTGGCACCGTCTCCAAGGCCGTTGTCACC 60 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || || ||||| ||||| || |||||||||| ||| ||||| Sbjct 61 GTCCCCGCCTACTTCAACGACTCTCAACGTCAGGCTACCAAGGACGCTGGTGCCATTGCC 120 Query 195782 GGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 ||||| | ||| || | || ||||| || || || || ||||| || ||||| ||||| Sbjct 121 GGTCTCGA-TGTCCTCCGTATCATCAACGAGCCTACTGCCGCTGCTATCGCTTACGGTCT 179 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900 |||||||| || | || || || || |||||||| || || ||||||||||| || Sbjct 180 TGACAAGAAGTCTGAGGGCGAGAAGAACGTTTTGATCTTCGACCTTGGTGGTGGTACTTT 239 Query 195901 TGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGA 195960 |||||||| ||| | | ||||| | ||||| ||||| || |||||||| |||||||| Sbjct 240 CGATGTCTCTCTTTTGACCATTGAGGAGGGTATCTTCGAGGTCAAGGCTACCGCTGGTGA 299 Query 195961 TACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGATGAGT 196019 ||||| || |||||||| || || || || ||| || || || ||| | |||| Sbjct 300 CACTCACCTTGGTGGTGAGGACTTTGACAACCGACTTGTCAACCACTTCGTC-CAGGAGT 358 Query 196020 TCCGTCGAAAGAATAAGAAAGATATTTC---------------TGGA------AATCCT- 196057 || | ||||| ||||| | || || |||| ||| || Sbjct 359 TCAAGAGGAAGAACAAGAAGGGTAAGTCACCTACGATTACTCATGGATGAGTTAATGCTG 418 Query 196058 ----------------------------AGGGCTCTTCGTCGGCTTAGGACTGCATGTGA 196089 | ||||| || || || | || || ||||| Sbjct 419 ATCTGCTGTAGACCTTTCTTCTAACGCCCGAGCTCTCCGACGACTCCGAACCGCCTGTGA 478 Query 196090 ACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTT 196149 ||| || || |||||||| ||||| | ||||| || | | ||||||| || || | || Sbjct 479 ACGAGCTAAGCGAACTCTTTCTTCCGCTGCTCAGACCACGATTGAGATCGACTCTCTCTT 538 Query 196150 TGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCT-- 196207 ||||| || |||||||| || | || |||||||| || || |||||| | || | Sbjct 539 CGACGGTATCGACTTCTACACTTCCATCACCCGTGCCCGATTCGAAGAGCT---CTGTCA 595 Query 196208 -GATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGA 196266 || | || | | ||||| || || || | || || || ||| | ||||| || Sbjct 596 GGACCTCTTCCGATCGACCATGGACCCCGTCGAGAAGGTTCTCCGAGACTCCAAGATCGA 655 Query 196267 TAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCA 196326 ||||| ||| | || || |||||||| || || || |||||||| || ||||| || Sbjct 656 CAAGTCCTCCGTTAACGAGATCGTCCTTGTCGGTGGTTCCACCCGTATCCCCAAGATCCA 715 Query 196327 ACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGA 196386 || | |||| | | ||| | ||| |||| | |||||||| || || Sbjct 716 GAAGCTTGTTTCCGACATGTTCTCTGGCCGAGAGCCCAACAGGTCCATCAACCCCGACGA 775 Query 196387 AGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAA 196446 || || || |||||||| ||||| ||||||||||| || | || ||||| | | | Sbjct 776 GGCCGTCGCCTATGGTGCCGCCGTCCAGGCTGCTATCCTTAC---TGGTGACACTTCTGA 832 Query 196447 CGTC---CAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGC 196503 | | || || | || | || || ||||| || | ||| ||||| | || || || Sbjct 833 GGCCACTCAGGACTTGCTCTTGCTCGACGTTGCTCCTCTCTCCATGGGTATCGAGACTGC 892 Query 196504 GGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACA 196563 |||||| | ||||| | || | || ||||| ||| | || || |||||| | Sbjct 893 TGGTGGTATCATGACCCCCTTGATCAAGAGAAACACCACTGTCCCCACCAAGAAGTCTGA 952 Query 196564 AGTCTTTTCAACGTATTCCGATAATCAACCAGGTGT 196599 ||||| || || || || || || || || ||||| Sbjct 953 GGTCTTCTCTACCTACTCTGACAACCAGCCTGGTGT 988 >seq334 Length=290900 Score = 221 bits (244), Expect = 2e-52 Identities = 187/230 (81%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| |||||||| || || | || ||||| |||||||| || || || ||||||| Sbjct 78289 GTATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACTATCACTCTTGAAGTCGAGTCGT 78348 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | ||||| ||||| ||| | || || |||||||| || |||||||| ||||| || |||| Sbjct 78349 CTGACACTATCGACAACGTTAAGGCGAAGATTCAGGACAAGGAAGGTATTCCTCCTGATC 78408 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||||||| | ||||||||||||||||| ||||| ||||| ||||| || | || |||| Sbjct 78409 AGCAACGATTGATTTTTGCTGGTAAACAACTTGAGGATGGTCGTACTCTTTCCGACTACA 78468 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || | |||||||||||||| || ||||||||||| | || || |||||| Sbjct 78469 ACATCCAAAAGGAGTCTACCCTTCACCTTGTTCTCCGTCTGCGTGGTGGT 78518 Score = 172 bits (190), Expect = 7e-38 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||||||||| || |||||||| || || ||||| || ||||| || || || | Sbjct 77782 GTATGCAAATCTTCGTCAAAACCCTCACCGGCAAAACCATTACCCTTGAAGTCGAAAGCT 77841 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || ||||| || |||| |||||||| ||||| ||||| || || || || |||| Sbjct 77842 CTGATACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCCCCTGATC 77901 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||||||||| || || || || ||||| ||||||||||| || || || | ||||||| Sbjct 77902 AGCAACGACTCATCTTCGCCGGAAAACAACTTGAAGATGGCCGAACTCTTTCCGATTACA 77961 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | | |||||||||||||| || || || || | | || || |||||| Sbjct 77962 ATATCCAAAAGGAGTCTACCCTCCATCTCGTCTTGCGTCTCCGAGGTGGT 78011 Score = 149 bits (164), Expect = 8e-31 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 171883 CTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAA 171942 ||||| || || || ||||| || || || || ||| || || ||||| ||| |||| Sbjct 78593 CTTACGGGTAAGACAATCACTCTTGAAGTCGAATCGAGCGATACCATCGACAACGTCAAG 78652 Query 171943 GCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGT 172002 |||||||| ||||| ||||| || || || || |||||||||||||| || || || || Sbjct 78653 GCCAAGATCCAAGACAAGGAGGGTATCCCCCCTGATCAGCAACGACTCATCTTCGCCGGA 78712 Query 172003 AAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTA 172062 ||||| ||||||||||| || || || | |||||||| | |||||||||||||| || Sbjct 78713 AAACAACTTGAAGATGGCCGAACTCTTTCCGATTACAATATCCAAAAGGAGTCTACCCTC 78772 Query 172063 CACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | | || || |||||| Sbjct 78773 CATCTCGTCTTGCGTCTCCGAGGTGGT 78799 Score = 145 bits (160), Expect = 1e-29 Identities = 139/178 (78%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || || || || || || || || |||||||| || || || ||||| || Sbjct 77505 ATGCAAATTTTCGTCAAGACTCTCACCGGTAAGACTATCACTCTTGAAGTGGAGTCTTCC 77564 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| |||||||| ||||| ||||| || || || || || ||| Sbjct 77565 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCTCCTGACCAG 77624 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||||| | || ||||||||||| |||||||||||||| | || ||| | || |||| Sbjct 77625 CAACGATTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCAGGACTCTCTCCGACTACA 77682 >seq490 Length=110099 Score = 205 bits (226), Expect = 1e-47 Identities = 569/859 (66%), Gaps = 19/859 (2%) Strand=Plus/Minus Query 78068 TTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAG 78127 || || || ||||||||||| || || |||||||| || ||||| | || | ||||| Sbjct 14921 TTCAACGCTGGTACTCCCCGACCCCAAATGTCATCATGCTTCCTCGTGGCCATGAAGGAT 14862 Query 78128 GACTCTATTAATGGTATATACGGGACTCTCACAGAG-TGTGCTCAGATTTCTAAGTGGGC 78186 ||||| ||| ||||||| |||| ||||||| ||| ||||||||||| || ||| || Sbjct 14861 GACTCCATTGATGGTATCTACGATACTCTCA-AGACCTGTGCTCAGATCTCCAAGACTGC 14803 Query 78187 TGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAAC 78246 |||||||| |||||||| |||||| || | ||||| || ||| ||| || || Sbjct 14802 CGGTGGTATTGGTCTTCACATTCACAATATCCGTGCGAAGGGCTCCTACATTGCCGGTAC 14743 Query 78247 TAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTA 78306 |||||| | || | || || ||||||||||| | | | | | || ||||| || || Sbjct 14742 CAATGGTTACTCCAACGGCATCATTCCTATGCTCCGAGCTTACGACGCCACAGCTCGATA 14683 Query 78307 TGTCAACCAAGCGGGTCGTAGGAAG------GGGTCATTCGCTATGTACCTTGAACCTTG 78360 || | ||| ||| ||| ||| || | ||||| || || ||||| ||||| Sbjct 14682 CGTTGATCAA---GGTGGTAACAAGCGTCCTGGTGCCTTCGCCATCTATCTTGAGCCTTG 14626 Query 78361 GCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCG 78420 |||||| |||||| | || || | || | | ||||| ||| | ||||| | || Sbjct 14625 GCACGCTGATGTATTTGACTTCATTGACTTAAGGAAGAACCATGGTAAGGAGGAGGTACG 14566 Query 78421 ATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGA 78480 | | ||| | ||| || | ||||| | |||||||| |||||| | || || Sbjct 14565 AGCTCGTGATCTTTTCTACGCCCTCTGGATCTCCGATCTTTTCATGAAGCGTGTCGAATC 14506 Query 78481 AGGAGGTAAATGGTCTCTTTTCTGTCCAGATAAGACTAAGGGTCTTTCAGATGTATACGG 78540 | || | ||| ||||| | ||||| | || || ||| | || || ||||| Sbjct 14505 CGATGGGGATTGGACTCTTATGTGTCCCGCCGAGTGCCCTGGACTTGCCGACGTTTACGG 14446 Query 78541 GGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTC-TCGCTATTAAGACAA 78599 |||||||| ||||| | || | |||| ||||| ||| | | | || || | Sbjct 14445 CGAAGAATTTGAAAAGCTTTATGAGAGCTACG-AGAGGCAGGGCAAGGGAAGGAAAACTA 14387 Query 78600 TTGATGCATCTGAA-CTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCG 78658 | | || | ||| || ||| || || || | |||||| ||||| || ||| Sbjct 14386 TCAAAGC-CCAGAAGCTTTGGTTCGCCATCCTCGAGGCTCAAACCGAGACTGGTGTCCCT 14328 Query 78659 TATATGCTATACAAAGACAGCTG-TAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCAT 78717 ||||| ||||| || |||| ||| ||||| ||||||||| |||| ||| ||| Sbjct 14327 TATATCTGCTACAAGGA-TGCTGCCAACTCCAAGTCCAACCAAAAGCACCTTGGTACCAT 14269 Query 78718 CAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATACACGGATAAGAATGAAACAGCTGT 78777 |||| | |||||| || || ||||| |||| || | | ||||| ||||| Sbjct 14268 CAAATCCAGTAACCTCTGTACTGAAATCATGGAGTATTCTTCTCCTGATGAAGTTGCTGT 14209 Query 78778 ATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGATCGAGAA-TTAAAGACATTTG 78836 |||||||| | ||| | ||||| || || || || | ||| | | | | || Sbjct 14208 CTGTAATCTTGCTTCTCTTGCTCTTCCTGCCTTCGTAGACCTTGAACGTCGCGTC-TATG 14150 Query 78837 ATTATTCAAAGCTCCACGAAATTACAAAAATCGTAACTAAAAATTTAAATCGTGTAATTG 78896 | | |||||| ||||| ||||| || | || || || || | || |||||| Sbjct 14149 ACTTCAAAAAGCTGCACGAGATTACCAAGGTTGTTACAAAGAACCTTGATACTGTAATCA 14090 Query 78897 ACCGTAACTACTACCCAGT 78915 |||||||||||| ||||| Sbjct 14089 CCCGTAACTACTATCCAGT 14071 >seq167 Length=6891 Score = 172 bits (190), Expect = 7e-38 Identities = 472/717 (66%), Gaps = 12/717 (2%) Strand=Plus/Minus Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| ||||||| || || || || | || || |||||||| | ||| ||||| Sbjct 3719 GTTCCTGCCTACTTCAACGACTCTCAGCGTCTCGCCACTAAGGACGCCGGTGCCATTGCC 3660 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| | || | |||||||| ||||| || || || || ||||| || ||||| Sbjct 3659 GGTCTTGAGGTGCTCCGTATTATCAACGAACCTACTGCTGCCGCTATTGCCTACGGTCTT 3600 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 ||| |||| | || || || ||| || | ||||| || | ||||||||||| || Sbjct 3599 GACGAGAAGACTGAGGAGGAGCGAAACGTCCTCATCTTCGACTTGGGTGGTGGTACTTTC 3540 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 |||||||| ||||| | ||| | || | ||| || ||||| ||||||||||| Sbjct 3539 GATGTCTCTCTTCTTACCATTCAGGGCAAGGTCTTCTCTGTCAAGGCCACTGCTGGTGAC 3480 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGT---CATTTGTCTGATGAG 196018 |||||||| |||||||| || ||||| || | |||| | || || | |||| Sbjct 3479 ACTCATCTTGGTGGTGAGGACTTCGA-CAACAAC--CTCCTTGAGCACTTCAAGGCTGAG 3423 Query 196019 TTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGG 196078 ||| | |||| ||| || || |||| | | | ||| | || || | || Sbjct 3422 TTCAAGAGGAAGACCAAGCTTGACATCTCTGACGACGCCCGTGCTTTGCGACGATTGAGA 3363 Query 196079 ACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATT 196138 |||| ||||| ||||| || |||||||||||||| |||| || | || ||| | Sbjct 3362 TCTGCTTGTGAGCGTGCTAAGCGAACTCTCTCTTCCGTTACTCAGACCACCGTCGAGGTC 3303 Query 196139 GATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAG 196198 || || | | | || | ||||||| | | | || || ||||| | || || ||| Sbjct 3302 GACTCTCTCTACCAGGGTACCGACTTCTCTTCCAACATCACTCGTGCTAGGTTCGAGGAG 3243 Query 196199 TTAAACTCTGATTTGTTTAGGAAGTGTA---TGGAACCTGTTGAACAAGTACTTCGTGAC 196255 | || | | | | || |||| || | || || || || | || || ||| Sbjct 3242 ATCAATGCCG--TCGCTT-TCAAGTCTACCGTTGACCCCGTAGAGAAGGTCCTCAAGGAC 3186 Query 196256 GCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATT 196315 | ||||| | |||||||| || ||||||||||| || || || |||||||| Sbjct 3185 TCCAAGATCCCCGCCGCCAAGGTTGACGACATTGTCCTTGTTGGTGGTTCTACCCGTATC 3126 Query 196316 CCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATC 196375 || ||||| ||| | | || | ||| | | | | ||||| | ||| Sbjct 3125 CCCAAGATCCAATCTCTCGTCTCCGAGTACTTTGGTGGTCGTCAGCTCAACAAGTCCATC 3066 Query 196376 AACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGT 196432 ||||| || || || |||||||| ||||| ||||| |||||||| | ||| | ||| Sbjct 3065 AACCCCGACGAGGCTGTTGCTTACGGTGCCGCCGTCCAGGCTGCCGTCCTCACCGGT 3009 >seq379 Length=127290 Score = 120 bits (132), Expect = 4e-22 Identities = 285/420 (68%), Gaps = 27/420 (6%) Strand=Plus/Minus Query 198539 TGGTGCCCGAATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCT 198598 ||||||| ||| || || |||||| | || ||||| |||||||||||||||| ||||| Sbjct 93345 TGGTGCCAAAATTCCTCGGGGTGCTATCCTTTCCGGTCCCCCGGGTACTGGTAAGACCCT 93286 Query 198599 TCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCCTTTCTT-CAGTGCTCCGCGGC-G 198656 ||| || |||| ||| || ||| | |||| || || ||| | || ||| | | | Sbjct 93285 TCTCGCCAAGGCTACCGCCGGAGAAGCTGGTGTGCCTTTCCTTTCCGT-CTCTGGTTCTG 93227 Query 198657 AGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAA 198716 |||| | |||| ||||| || || || ||| | || ||||| || | || | ||| Sbjct 93226 AGTT-CGTCGAAATGTTTGTCGGCGTCGGTCCCTCCCGAGTCCGTGACTTGTTCG--CAA 93170 Query 198717 GCACGTGAAAATCAAC----CATGTATCATCTTCATTGATGAGATTGACGCTGTTGGTAA 198772 ||| || | ||| |||||||||||||| ||||||| || ||||| | || || Sbjct 93169 --ACGCCAAGAAGAACGCCCCATGTATCATCTTCGTTGATGAAATCGACGCCATCGGCAA 93112 Query 198773 GAAGCGTGG------TGGAACTACTACACCTGGTAATGATGAGCGTGAGCAGACGATTAA 198826 | ||||| ||| | ||| |||||| ||||||||||| || | || Sbjct 93111 GTCCCGTGGCAAGGGTGGCA--ACTTTGG-TGGTAACGATGAGCGTGAATCCACTTTGAA 93055 Query 198827 CCAGCTTCTCACTGAGATGGATGGTTTTGACA---ATGAGACTGGTATCGTGGTGATTGC 198883 ||||||| | || ||||| ||||| | || | ||| | |||| || | || Sbjct 93054 CCAGCTTTTGGTCGAAATGGACGGTTTCGGCACCAACGAGCACG---TCGTCGTTTTGGC 92998 Query 198884 TGCTACAAATAGGATTGATATCCTAGATGATGCACTGCTTCGTCCCGGTCGATTCGACCG 198943 || ||| || || |||| |||| ||| ||| | | ||||| |||||||||||||| Sbjct 92997 TGGTACGAACAGACCTGATGTCCTTGATTCTGCCTTAATGCGTCCTGGTCGATTCGACCG 92938 >seq646 Length=80598 Score = 113 bits (124), Expect = 6e-20 Identities = 119/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 171883 CTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAA 171942 ||||| ||||| || |||||||||||||| ||||| || ||||| ||||| || |||| Sbjct 65583 CTTACCGGAAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATCGACAATGTCAAG 65524 Query 171943 GCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGT 172002 ||||||| || || ||||| || || || || || ||||| ||| | || || || || Sbjct 65523 TCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGATTGATCTTCGCCGGA 65464 Query 172003 AAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 || ||||| || || || | ||||| |||| |||| Sbjct 65463 AAGCAGCTCGAGGACGGCAGGACCCTTTCTGACTACA 65427 >seq84 Length=29946 Score = 109 bits (120), Expect = 7e-19 Identities = 195/281 (69%), Gaps = 14/281 (5%) Strand=Plus/Minus Query 195711 CAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTG 195770 |||| | ||||| ||||||||||||| || || || || ||||| || ||||| |||| Sbjct 14389 CAGTCATCACTGTCCCTGCTTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGATGCTG 14330 Query 195771 CTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 |||| || ||||| | ||| | | ||||| || || || || ||||| ||| Sbjct 14329 GCTCTATCGCTGGTCTTGAAGTCCTTCGTGTCATCAACGAGCCTACTGCCGCTGCTCTTG 14270 Query 195831 CTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTG--ATCTTTGATCTCGG 195888 | |||||||| ||||||||| || || | || |||| ||| || | || Sbjct 14269 CCTATGGTCTCGACAAGAACGAGTCCGCGG-------TG-ATTGCTGTCTACGACTTGGG 14218 Query 195889 TGGTGGTACGTTTGATGTCTCACTTCTCAATAT--TGAAGGTGGTATATTCGAAGTAAAG 195946 ||||||||| || ||| |||| | || | || |||| ||| | ||||| || ||| Sbjct 14217 TGGTGGTACTTTCGATATCTCGATCCTTGAGATGCAGAAG--GGTGTTTTCGAGGTCAAG 14160 Query 195947 GCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||| ||||| || || || ||||||||||| ||||| Sbjct 14159 TCTACCAACGGTGACACCCACCTTGGTGGTGAAGACTTCGA 14119 >seq40 Length=47729 Score = 104 bits (114), Expect = 3e-17 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 195881 GATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAA 195940 || || ||||||||||| || |||||||| || ||| |||||| | |||| | || || Sbjct 26902 GACCTTGGTGGTGGTACTTTCGATGTCTCTCTCCTCTCTATTGAGGATGGTGTCTTTGAG 26961 Query 195941 GTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||||||||||||| ||||| || ||||||||||||||||| Sbjct 26962 GTCTTGGCTACTGCTGGTGACACTCACCTTGGTGGTGAAGATTTCGA 27008 Score = 86.0 bits (94), Expect = 8e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || |||||| | || ||||| || ||||||| |||||||| | || ||||| || Sbjct 26233 GTTGAAATTATCGCCAACGACCAGGGTAACCGTATCACTCCATCATGGGTCGCCTTCACT 26292 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | || || || |||| |||||||| || |||||| | ||| ||||| || Sbjct 26293 GAGGAGGAGCGACTTATTGGTGATGCCGCTAAGAATCAGGCCTCTAACAACCCCGAGAAC 26352 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCG 195510 || || || ||||||||||| | || ||||| Sbjct 26353 ACCGTTTTCGACGCGAAGCGATTAATCGGTCG 26384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657856898625680