Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157 55.1_202017-07-07] 669 sequences; 18,368,897 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq334 102 7e-17 >seq334 Length=290900 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| || | ||| | ||||| || ||||| |||||||| ||| | | || | Sbjct 77998 CGCAAGACGAGATGGAGGGTAGACTCCTTTTGGATATTGTAATCGGAAAGAGTTCGGCCA 77939 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| || ||||| |||||| | ||||| || || ||||| || || | |||||| || Sbjct 77938 TCTTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGATCAGGGGGGATACCCTCCTTG 77879 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| || | | || | || || | | ||| ||||| || || || Sbjct 77878 TCTTGGATCTTGGCCTTGACATTGTCGATGGTATCAGAGCTTTCGACTTCAAGGGTAATG 77819 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | |||||| || || ||||| || |||||||||||| Sbjct 77818 GTTTTGCCGGTGAGGGTTTTGACGAAGATTTGCATA 77783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424930935323928