Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022175 45.1_202017-07-13] 565 sequences; 18,083,839 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq407 98.7 8e-16 >seq407 Length=246863 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || ||||||||||| || || ||||| | || ||| || |||| || || || || || Sbjct 33466 GTAGACTCCTTTTGGATATTGTAGTCGGAAAGAGTTCGGCCGTCTTCAAGTTGCTTTCCG 33407 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || |||| | || ||||||||| ||| | || |||||||| |||||| || Sbjct 33406 GCGAAAATCAATCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCTTGGATCTTGGCCTTA 33347 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| |||||| | || ||| | ||||||||| |||||||| | ||| Sbjct 33346 ACATTGTCGATGGTATCAGAGCTTTCGACTTCAAGGGTAATGGTTTTGCCGGTGAGGGTT 33287 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || |||||||| Sbjct 33286 TTGACGAAGATTTGCAT 33270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422256292349540