Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022175
45.1_202017-07-13] 565 sequences; 18,083,839 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq407 174 3e-38
seq176 107 4e-18
>seq407
Length=246863
Score = 174 bits (192), Expect = 3e-38
Identities = 185/244 (76%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182
|||| | ||||||||||| |||| | || ||||| || ||||||| |||| ||||
Sbjct 19043 AGAGGAGACAGGCAAAGTCGGTGTGGAGACCCTCGTCTCGAGAGATGAGCTCGTTAGAGA 19102
Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242
|| |||||||||||||| || | || || |||||||| || | ||||||||| ||||
Sbjct 19103 AGGTGAGACCAGGCATGAGACCTCGCTTCTTAAGCCAGAAGATAGACGCGAAAGAACCAG 19162
Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302
|||||||||| |||||||| || || || || |||| | ||| |||||| ||| || |
Sbjct 19163 AGAAGAAGATACCCTCCACGGCAGCAAAAGCAATGAGTCGCTCGCCGAAACAAGATTTTT 19222
Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362
||| |||||||| ||| |||||||| |||||||| ||| || || || || || |
Sbjct 19223 GGTCAGAGATCCATCGAAGAGCCCAGTCGGCCTTCTTTCGGATACAAGGAATGGTGTCCA 19282
Query 48363 TGGC 48366
| ||
Sbjct 19283 TAGC 19286
>seq176
Length=37993
Score = 107 bits (118), Expect = 4e-18
Identities = 298/453 (66%), Gaps = 8/453 (2%)
Strand=Plus/Minus
Query 213531 TACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTT 213590
||||||||||| || || || ||||| ||| || |||||| || |||| || |||||
Sbjct 24250 TACTCCATGATTTCAGTACAGAGGTTACTGGATTTGATGGTACCAAGGTGCTTTTGGTTG 24191
Query 213591 GACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGAC 213650
||||| | |||||||| |||||||||| ||||| ||| ||||| || || | |
Sbjct 24190 GACTTGGAGTTGGCAGCATCCTTGTAGCAGATGTAAGGGACACCGGTTTCGGTTTGAGCC 24131
Query 213651 ACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTA 213710
| || || | ||| || | | ||| |||| ||| | || || |
Sbjct 24130 TCGAGGATGGCGAACCAAAGCTTCTGGGCTTTGATAGTTTTCCTTCCCTTGCCCTGCCT- 24072
Query 213711 GCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGA 213770
|||||| || || |||| | ||||| | || | || | | ||||| ||
Sbjct 24071 --CTCGTAGCTCTCATAAAGCTTTTCAAATTCTTCACCGTATACGTCGGCAAGTCCAGGG 24014
Query 213771 CAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGG 213830
|| ||||||||||| || |||| ||||| || | ||| | || |||||| ||
Sbjct 24013 CACTCGGCGGGACACATAAGAGTCCAATCCCCATCGGATTCGACACGCTTCATGAAAAGA 23954
Query 213831 TCCGGGACCCACAGCGCGGTGAACAGGTC-CCTGGTCCTCCTCTCGTCCACTCCAGAGTT 213889
|| | || ||| || ||| ||| ||||| | | || | | ||| ||| ||| |||
Sbjct 23953 TCGGAGATCCAGAGGGCGTAGAAAAGGTCACGAGCTCGTAC-CTCCTCCTTACCATGGTT 23895
Query 213890 TTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAA 213949
|| | | || | |||||||| | || |||||||| ||||| | |||||||| ||
Sbjct 23894 CTTCCTTAAGTCAATGAAGTCAAATACATCAGCGTGCCAAGGCTCAAGATAGATGGCGAA 23835
Query 213950 GGCGCCCGGCCTCTTG---CCGCCCTGGTCCAC 213979
||| || || | |||| || || ||||| ||
Sbjct 23834 GGCACCAGGACGCTTGTTACCACCTTGGTCAAC 23802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931526221049600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |