Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022175 45.1_202017-07-13] 565 sequences; 18,083,839 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq407 226 4e-54 seq355 226 4e-54 seq176 201 1e-46 seq352 187 3e-42 seq57 187 3e-42 seq556 113 6e-20 seq90 113 6e-20 seq50 109 7e-19 seq448 95.1 2e-14 >seq407 Length=246863 Score = 226 bits (250), Expect = 4e-54 Identities = 188/230 (82%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| |||||||| || || | || |||||||||||||| || || || ||||||| Sbjct 33775 GTATGCAGATCTTTGTCAAGACTTTGACCGGAAAAACTATCACTCTTGAAGTCGAGTCGT 33834 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | ||||| ||||| ||| | || || |||||||| || |||||||| ||||| || |||| Sbjct 33835 CTGACACTATCGACAACGTTAAGGCGAAGATTCAGGACAAGGAAGGTATTCCTCCTGATC 33894 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||||||| | ||||||||||||||||| ||||| ||||| ||||| || | || |||| Sbjct 33895 AGCAACGATTGATTTTTGCTGGTAAACAACTTGAGGATGGTCGTACTCTTTCCGACTACA 33954 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || | |||||||||||||| || ||||||||||| | || || |||||| Sbjct 33955 ACATCCAAAAGGAGTCTACCCTTCACCTTGTTCTCCGTCTGCGTGGTGGT 34004 Score = 158 bits (174), Expect = 2e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 171883 CTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAA 171942 ||||| || || || ||||| ||||| || || ||| || || ||||| ||| |||| Sbjct 34079 CTTACGGGTAAGACAATCACTCTCGAAGTCGAATCGAGCGATACCATCGACAACGTCAAG 34138 Query 171943 GCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGT 172002 |||||||| ||||| ||||| || || || || |||||||||||||| || || || || Sbjct 34139 GCCAAGATCCAAGACAAGGAGGGTATCCCCCCTGATCAGCAACGACTCATCTTCGCCGGA 34198 Query 172003 AAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTA 172062 ||||| ||||||||||| || || || | |||||||| ||||||||||||| ||||| Sbjct 34199 AAACAACTTGAAGATGGCCGAACTCTTTCCGATTACAATATTCAAAAGGAGTCCACTCTC 34258 Query 172063 CACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | | || || |||||| Sbjct 34259 CATCTCGTCTTGCGTCTCCGAGGTGGT 34285 Score = 145 bits (160), Expect = 1e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||||||||| || |||||||| || || ||||| || ||||| || || || | Sbjct 33268 GTATGCAAATCTTCGTCAAAACCCTCACCGGCAAAACCATTACCCTTGAAGTCGAAAGCT 33327 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || ||||| || | || |||||||| ||||| ||||| || || || || || | Sbjct 33328 CTGATACCATCGACAATGTTAAGGCCAAGATCCAAGACAAGGAGGGTATCCCCCCTGACC 33387 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||| ||| | ||||| || || || || |||||||| || || || || | || |||| Sbjct 33388 AGCAGCGATTGATTTTCGCCGGAAAGCAACTTGAAGACGGCCGAACTCTTTCCGACTACA 33447 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | | |||||||||||||| || || || || | | || || |||||| Sbjct 33448 ATATCCAAAAGGAGTCTACCCTCCATCTCGTCTTGCGTCTCCGAGGTGGT 33497 Score = 141 bits (156), Expect = 1e-28 Identities = 138/178 (78%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || || || || || || || || |||||||| || || || ||||| || Sbjct 32990 ATGCAAATTTTCGTCAAGACTCTCACCGGTAAGACTATCACTCTTGAAGTGGAGTCTTCC 33049 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| |||||||| || || ||||| || || || || || ||| Sbjct 33050 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAG 33109 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||||| | || ||||||||||| |||||||||||||| | || ||| | || |||| Sbjct 33110 CAACGATTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCAGGACTCTCTCCGACTACA 33167 >seq355 Length=82685 Score = 226 bits (250), Expect = 4e-54 Identities = 266/357 (75%), Gaps = 2/357 (1%) Strand=Plus/Minus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 || ||||| ||||| || ||||| | | |||||||||||||||||| || ||| | | Sbjct 415 CCTGAAGAGATTTCTTCCATGGTTCTTACTAAGATGAAGGAGACTGCTGAGGCTTACCTT 356 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 ||| || || | || ||||| || || || || ||||||| || || ||||| Sbjct 355 GGTGGCACCGTCTCCAAGGCCGTTGTTACCGTCCCCGCCTACTTCAACGACTCTCAACGT 296 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGA 195810 ||||| || |||||||||| ||| ||||| ||||| | |||| | | || ||||| || Sbjct 295 CAGGCTACCAAGGACGCTGGTGCCATTGCCGGTCTCGA-TGTCCTCCGTATCATCAACGA 237 Query 195811 ACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGT 195870 || || || ||||| || ||||| || || |||||||| || | || || || || Sbjct 236 GCCTACTGCCGCTGCTATCGCTTACGGCCTTGACAAGAAGTCTGAGGGCGAGAAGAACGT 177 Query 195871 ATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGG 195930 |||||||| || || ||||||||||| || |||||||| ||| | | |||||| | || Sbjct 176 TTTGATCTTCGACCTTGGTGGTGGTACTTTCGATGTCTCTCTTTTGACTATTGAGGAGGG 117 Query 195931 TATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||| ||||| || |||||||| |||||||| ||||| || |||||||| || || || Sbjct 116 TATCTTCGAGGTCAAGGCTACCGCTGGTGACACTCACCTTGGTGGTGAGGACTTTGA 60 >seq176 Length=37993 Score = 201 bits (222), Expect = 1e-46 Identities = 568/859 (66%), Gaps = 19/859 (2%) Strand=Plus/Plus Query 78068 TTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAG 78127 || || || ||||||||||| || || |||||||| || ||||| | || | ||||| Sbjct 23562 TTCAACGCCGGTACTCCCCGACCCCAAATGTCATCATGCTTCCTCGTGGCCATGAAGGAT 23621 Query 78128 GACTCTATTAATGGTATATACGGGACTCTCACAGA-GTGTGCTCAGATTTCTAAGTGGGC 78186 ||||| ||| ||||||| |||| ||||||| ||| ||||||||||| || ||| || Sbjct 23622 GACTCCATTGATGGTATCTACGATACTCTCA-AGACCTGTGCTCAGATCTCCAAGACTGC 23680 Query 78187 TGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAAC 78246 |||||||| |||||||| |||||| || | ||||| || ||| ||| || || Sbjct 23681 CGGTGGTATTGGTCTTCACATTCACAATATCCGTGCGAAGGGCTCCTACATTGCCGGTAC 23740 Query 78247 TAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTA 78306 |||||| | || | || || ||||||||||| | | | | | || ||||| || || Sbjct 23741 CAATGGTTACTCCAACGGTATCATTCCTATGCTCCGAGCTTACGACGCCACAGCTCGATA 23800 Query 78307 TGTCAACCAAGCGGGTCGTAGGAAG------GGGTCATTCGCTATGTACCTTGAACCTTG 78360 || ||||| ||| ||| ||| || | ||||| || || ||||| ||||| Sbjct 23801 CGTTGACCAA---GGTGGTAACAAGCGTCCTGGTGCCTTCGCCATCTATCTTGAGCCTTG 23857 Query 78361 GCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCG 78420 |||||| |||||| | || || | || | | ||||| ||| | ||||| | || Sbjct 23858 GCACGCTGATGTATTTGACTTCATTGACTTAAGGAAGAACCATGGTAAGGAGGAGGTACG 23917 Query 78421 ATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGA 78480 | | || | ||| || | ||||| | |||||||| |||||| | || || Sbjct 23918 AGCTCGTGACCTTTTCTACGCCCTCTGGATCTCCGATCTTTTCATGAAGCGTGTCGAATC 23977 Query 78481 AGGAGGTAAATGGTCTCTTTTCTGTCCAGATAAGACTAAGGGTCTTTCAGATGTATACGG 78540 | || | ||| ||||| | ||||| | || || ||| | || |||||||| Sbjct 23978 CGATGGGGATTGGACTCTTATGTGTCCCGCCGAGTGCCCTGGACTTGCCGACGTATACGG 24037 Query 78541 GGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTC-TCGCTATTAAGACAA 78599 |||||||| ||||| | || | |||| ||||| ||| | | | || || | Sbjct 24038 TGAAGAATTTGAAAAGCTTTATGAGAGCTACG-AGAGGCAGGGCAAGGGAAGGAAAACTA 24096 Query 78600 TTGATGCATCTGAA-CTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCG 78658 | | || | ||| || ||| || || || | |||||| || ||||| ||| Sbjct 24097 TCAAAGC-CCAGAAGCTTTGGTTCGCCATCCTCGAGGCTCAAACCGAAACCGGTGTCCCT 24155 Query 78659 TATATGCTATACAAAGACAGCTG-TAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCAT 78717 || || ||||| || |||| ||| ||||| ||||||||| |||| ||| ||| Sbjct 24156 TACATCTGCTACAAGGA-TGCTGCCAACTCCAAGTCCAACCAAAAGCACCTTGGTACCAT 24214 Query 78718 CAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATACACGGATAAGAATGAAACAGCTGT 78777 |||| | |||||| || || ||||| |||| || | | ||||| ||||| Sbjct 24215 CAAATCCAGTAACCTCTGTACTGAAATCATGGAGTATTCTTCTCCTGATGAAGTTGCTGT 24274 Query 78778 ATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGATCGAGAA-TTAAAGACATTTG 78836 |||||||| | ||| | ||||| || || || || | ||| | | | | || Sbjct 24275 CTGTAATCTTGCTTCTCTTGCTCTTCCTGCCTTCGTAGACCTTGAACGTCGCGTC-TATG 24333 Query 78837 ATTATTCAAAGCTCCACGAAATTACAAAAATCGTAACTAAAAATTTAAATCGTGTAATTG 78896 | | |||||| ||||| ||||| || | || || || || | | |||||| Sbjct 24334 ACTTCAAAAAGCTGCACGAGATTACCAAGGTTGTTACAAAGAACCTCGACACTGTAATCA 24393 Query 78897 ACCGTAACTACTACCCAGT 78915 |||||||||||| ||||| Sbjct 24394 CCCGTAACTACTATCCAGT 24412 >seq352 Length=69407 Score = 187 bits (206), Expect = 3e-42 Identities = 226/305 (74%), Gaps = 2/305 (1%) Strand=Plus/Plus Query 195630 CTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCA 195689 ||||||||||||| || || ||||| | || ||||||||||||||||| || ||| | Sbjct 69104 CTCCCGAAGAAATCTCTTCCATGGTCCTTATCAAGATGAAGGAGACTGCTGAGGCTTACC 69163 Query 195690 TGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAAC 195749 | ||| || || | || ||||| || || || || ||||||| || || |||| Sbjct 69164 TTGGTGGCACCGTCTCCAAGGCCGTTGTTACCGTCCCCGCCTACTTCAACGACTCTCAAC 69223 Query 195750 GACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAAT 195808 | ||||| || |||||||||| ||| ||||| ||||| | ||| || | || ||||| Sbjct 69224 GTCAGGCTACCAAGGACGCTGGTGCCATTGCCGGTCTCGA-TGTCCTCCGTATCATCAAC 69282 Query 195809 GAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAAT 195868 || || || || ||||| || ||||| ||||| |||||||| || | || || || Sbjct 69283 GAGCCTACTGCCGCTGCTATCGCTTACGGTCTTGACAAGAAGTCTGAGGGCGAGAAGAAC 69342 Query 195869 GTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGT 195928 || |||||||| || || ||||||||||| || |||||||| ||| | | |||||| | Sbjct 69343 GTTTTGATCTTCGACCTTGGTGGTGGTACTTTCGATGTCTCTCTTTTGACTATTGAGGAG 69402 Query 195929 GGTAT 195933 ||||| Sbjct 69403 GGTAT 69407 >seq57 Length=209335 Score = 187 bits (206), Expect = 3e-42 Identities = 475/717 (66%), Gaps = 12/717 (2%) Strand=Plus/Plus Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| ||||||| ||||| || || | || || |||||||| | ||| ||||| Sbjct 190437 GTTCCTGCCTACTTCAACGATTCTCAGCGTCTCGCCACTAAGGACGCCGGTGCCATTGCT 190496 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| | || | ||||| || ||||| || || || || ||||| || ||||| Sbjct 190497 GGTCTTGAGGTGCTCCGTATTATTAACGAACCTACTGCTGCCGCTATTGCCTACGGTCTT 190556 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 ||| |||| | || || || ||| || | ||||| || | ||||||||||| ||| Sbjct 190557 GACGAGAAGACCGAGGAGGAGCGAAACGTCCTCATCTTCGACTTGGGTGGTGGTACTTTT 190616 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 |||||||| ||||| | ||| | || | ||| || ||||| ||||||||||| Sbjct 190617 GATGTCTCTCTTCTTACCATTCAGGGCAAGGTCTTCTCTGTCAAGGCCACTGCTGGTGAC 190676 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGT---CATTTGTCTGATGAG 196018 |||||||| |||||||| || ||||| || | |||| | || || | |||| Sbjct 190677 ACTCATCTTGGTGGTGAGGACTTCGA-CAACAAC--CTCCTTGAGCACTTCAAGGCTGAG 190733 Query 196019 TTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGG 196078 ||| | |||| ||| || || |||| | || | ||| | || || | || Sbjct 190734 TTCAAGAGGAAGACCAAGCTTGACATCTCTGACGACGCTCGTGCTTTGCGACGATTGAGA 190793 Query 196079 ACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATT 196138 |||| ||||| ||||| || |||||||||||||| |||| || | || ||| | Sbjct 190794 TCTGCTTGTGAGCGTGCTAAGCGAACTCTCTCTTCCGTTACTCAGACCACCGTCGAGGTC 190853 Query 196139 GATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAG 196198 || || | | | || | ||||||| | | | || || ||||| | || || ||| Sbjct 190854 GACTCTCTCTACCAGGGTACCGACTTCTCTTCCAACATCACTCGTGCTAGGTTCGAGGAG 190913 Query 196199 TTAAACTCTGATTTGTTTAGGAAGTGTA---TGGAACCTGTTGAACAAGTACTTCGTGAC 196255 | ||| | | | | || |||| || | || || || || | || || ||| Sbjct 190914 ATCAACGCCG--TCGCTT-TCAAGTCTACCGTTGACCCCGTAGAGAAGGTCCTCAAGGAC 190970 Query 196256 GCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATT 196315 | ||||| | |||||||| || ||||||||||| || || || |||||||| Sbjct 190971 TCCAAGATCCCCGCCGCCAAGGTTGACGACATTGTCCTTGTTGGTGGTTCTACCCGTATC 191030 Query 196316 CCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATC 196375 || ||||| ||| | | || | ||| | | | | ||||| | ||| Sbjct 191031 CCCAAGATCCAATCTCTCGTCTCCGAGTACTTTGGTGGTCGTCAGCTCAACAAGTCCATC 191090 Query 196376 AACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGT 196432 ||||| || || || |||||||| ||||| ||||| |||||||| | ||| | ||| Sbjct 191091 AACCCCGACGAGGCTGTTGCTTACGGTGCCGCCGTCCAGGCTGCCGTCCTCACCGGT 191147 >seq556 Length=80375 Score = 113 bits (124), Expect = 6e-20 Identities = 282/417 (68%), Gaps = 21/417 (5%) Strand=Plus/Minus Query 198539 TGGTGCCCGAATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCT 198598 |||||| ||| || || |||||| | || ||||| |||||||||| ||||| ||||| Sbjct 12484 TGGTGCTAAAATTCCTCGGGGTGCTATCCTTTCCGGTCCCCCGGGTACCGGTAAGACCCT 12425 Query 198599 TCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCCTTTCTT-CAGTGCTCCGCGGC-G 198656 ||| || |||| ||| || ||| | |||| || || ||| | || ||| | | | Sbjct 12424 TCTCGCCAAGGCTACCGCCGGAGAAGCTGGTGTGCCTTTCCTTTCCGT-CTCTGGTTCTG 12366 Query 198657 AGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAA 198716 |||| | |||| ||||| || || || ||| | || ||||| || | || | | Sbjct 12365 AGTT-CGTCGAAATGTTTGTCGGCGTCGGTCCCTCCCGAGTCCGTGACTTGTTCGCAAAC 12307 Query 198717 GCACGTGAA-AATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGTAAGAA 198775 || | ||| ||| || |||||||||||| ||||||| || ||||| | || ||| Sbjct 12306 GC-CAAGAAGAATGCCCCGTGTATCATCTTCGTTGATGAAATCGACGCCATCGGCAAGTC 12248 Query 198776 GCGTGG------TGGAACTACTACACCTGGTAATGATGAGCGTGAGCAGACGATTAACCA 198829 ||||| ||| | ||| |||||| ||||||||||| || | ||||| Sbjct 12247 CCGTGGCAAGGGTGGCA--ACTTTGG-TGGTAACGATGAGCGTGAATCCACTTTGAACCA 12191 Query 198830 GCTTCTCACTGAGATGGATGGTTTTGA---CAATGAGACTGGTATCGTGGTGATTGCTGC 198886 |||| | || ||||| ||||| | ||| ||| | |||| || | |||| Sbjct 12190 GCTTTTGGTCGAAATGGACGGTTTCGGTACCAACGAGCACG---TCGTCGTTTTGGCTGG 12134 Query 198887 TACAAATAGGATTGATATCCTAGATGATGCACTGCTTCGTCCCGGTCGATTCGACCG 198943 |||||| || |||| |||| ||| ||| | | ||||| |||||||||||||| Sbjct 12133 TACAAACAGACCTGATGTCCTTGATTCTGCCTTAATGCGTCCTGGTCGATTCGACCG 12077 >seq90 Length=50681 Score = 113 bits (124), Expect = 6e-20 Identities = 119/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 171883 CTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAA 171942 ||||| ||||| || |||||||||||||| ||||| || ||||| ||||| || |||| Sbjct 24224 CTTACCGGAAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATCGACAATGTCAAG 24165 Query 171943 GCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGT 172002 ||||||| || || ||||| || || || || || ||||| ||| | || || || || Sbjct 24164 TCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGATTGATCTTCGCCGGA 24105 Query 172003 AAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 || ||||| || || || | ||||| |||| |||| Sbjct 24104 AAGCAGCTCGAGGACGGCAGGACCCTTTCTGACTACA 24068 >seq50 Length=70607 Score = 109 bits (120), Expect = 7e-19 Identities = 195/281 (69%), Gaps = 14/281 (5%) Strand=Plus/Plus Query 195711 CAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTG 195770 |||| | ||||| ||||||||||||| || || || || ||||| || ||||| |||| Sbjct 15569 CAGTCATCACTGTCCCTGCTTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGATGCTG 15628 Query 195771 CTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 |||| || ||||| | ||| | | ||||| || || || || ||||| ||| Sbjct 15629 GCTCTATCGCTGGTCTTGAAGTCCTTCGTGTCATCAACGAGCCTACTGCCGCTGCTCTTG 15688 Query 195831 CTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTG--ATCTTTGATCTCGG 195888 | |||||||| ||||||||| || || | || |||| ||| || | || Sbjct 15689 CCTATGGTCTCGACAAGAACGAGTCCGCGG-------TG-ATTGCTGTCTACGACTTGGG 15740 Query 195889 TGGTGGTACGTTTGATGTCTCACTTCTCAATAT--TGAAGGTGGTATATTCGAAGTAAAG 195946 ||||||||| || ||| |||| | || | || |||| ||| | ||||| || ||| Sbjct 15741 TGGTGGTACTTTCGATATCTCGATCCTTGAGATGCAGAAG--GGTGTTTTCGAGGTCAAG 15798 Query 195947 GCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||| ||||| || || || ||||||||||| ||||| Sbjct 15799 TCTACCAACGGTGACACCCACCTTGGTGGTGAAGACTTCGA 15839 >seq448 Length=45580 Score = 95.1 bits (104), Expect = 2e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 195881 GATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAA 195940 || || ||||||||||| || |||||||| || ||| |||||| | ||| | || || Sbjct 18493 GACCTTGGTGGTGGTACTTTCGATGTCTCTCTCCTCTCTATTGAGGACGGTGTCTTTGAG 18434 Query 195941 GTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||||||||||||| ||||| || |||||||| |||||||| Sbjct 18433 GTCTTGGCTACTGCTGGTGACACTCACCTTGGTGGTGAGGATTTCGA 18387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657857753846800