Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022175
45.1_202017-07-13] 565 sequences; 18,083,839 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq407 89.7 8e-13
>seq407
Length=246863
Score = 89.7 bits (98), Expect = 8e-13
Identities = 144/205 (70%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || || ||||| ||||||||||| || | |||||||| |||
Sbjct 33777 ATGCAGATCTTTGTCAAGACTTTGACCGGAAAAACTATCACTCTTGAAGTCGAGTCGTCT 33836
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||||| || || || || || || ||||| || ||||| || ||
Sbjct 33837 GACACTATCGACAACGTTAAGGCGAAGATTCAGGACAAGGAAGGTATTCCTCCTGATCAG 33896
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| ||||||||| ||| ||||| || || || ||| | ||| | || || || |
Sbjct 33897 CAACGATTGATTTTTGCTGGTAAACAACTTGAGGATGGTCGTACTCTTTCCGACTACA-- 33954
Query 156003 ATATCCAAA--GAGGCGACGCTTCA 156025
| ||||||| ||| | || |||||
Sbjct 33955 ACATCCAAAAGGAGTCTACCCTTCA 33979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731866831154000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |