Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022175 45.1_202017-07-13] 565 sequences; 18,083,839 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq407 102 7e-17 >seq407 Length=246863 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| || | ||| | ||||| || ||||| |||||||||||| | | || || Sbjct 33484 CGCAAGACGAGATGGAGGGTAGACTCCTTTTGGATATTGTAGTCGGAAAGAGTTCGGCCG 33425 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| || || || |||||| |||| | ||||| || || || || | |||||| || Sbjct 33424 TCTTCAAGTTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCAGGGGGGATACCCTCCTTG 33365 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| || | | || | || || | | ||| ||||| || || || Sbjct 33364 TCTTGGATCTTGGCCTTAACATTGTCGATGGTATCAGAGCTTTCGACTTCAAGGGTAATG 33305 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | |||||| || || ||||| || |||||||||||| Sbjct 33304 GTTTTGCCGGTGAGGGTTTTGACGAAGATTTGCATA 33269 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| || | ||| | || || || |||||||||||||| ||| | | || | Sbjct 34272 CGCAAGACGAGATGGAGAGTGGACTCCTTTTGAATATTGTAATCGGAAAGAGTTCGGCCA 34213 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| || ||||| |||||| | ||||| || || ||||| || || | |||||| || Sbjct 34212 TCTTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGATCAGGGGGGATACCCTCCTTG 34153 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| || | | | || | || || | | ||| ||||| ||||| || Sbjct 34152 TCTTGGATCTTGGCCTTGACGTTGTCGATGGTATCGCTCGATTCGACTTCGAGAGTGATT 34093 Query 27213 GATTTGCCCGTCAGA 27227 | || ||||| ||| Sbjct 34092 GTCTTACCCGTAAGA 34078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424931473928280