Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022175
45.1_202017-07-13] 565 sequences; 18,083,839 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq326 129 4e-25
>seq326
Length=71825
Score = 129 bits (142), Expect = 4e-25
Identities = 239/346 (69%), Gaps = 6/346 (2%)
Strand=Plus/Plus
Query 27382 TTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCC 27441
|| |||||||| || | | ||| || |||||||| ||| |||||| ||||| |||
Sbjct 33450 TTTGGGTTCCAAGCCGATAAGATAATCCGCCTGTCAGTTGGATTGTTCTTGATGGTGTCG 33509
Query 27442 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATG-TCCGTGTA 27500
| | ||||||| || || || || | || |||||| || || || |||||
Sbjct 33510 ATTACCCTTTGCAGTTGGTCGACTCCTTTGTCCTTATAGTCT-CCGTCGGCATCAGTGTA 33568
Query 27501 CTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 27560
||| || || ||||| ||||| |||||||||||||| |||||||| || || || ||
Sbjct 33569 CTCGGCACCAAAATGTCTCCACTGGAACCCGTACACAGGTCCCAGATCACCTTCCCTTCT 33628
Query 27561 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 27620
||| ||| || ||| |||| || ||| || ||||| ||||||||||| |||
Sbjct 33629 GTGGCCGAGCCCGACCTTCTCCAGGAATTCTTTGCTTCCGTTACCGTCCCAGATCCCTAC 33688
Query 27621 CCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 27680
|||| |||||| | |||| || || | || |||||||||| ||||| |
Sbjct 33689 GCCCTGACTAGAGAGCACCTTGGCGTCGGTACAGCCAGAAACGAACCACAAAAGCTCGGC 33748
Query 27681 CACGACGGCCTTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGGAA 27724
| |||| | | || ||||| | |||||||| ||||| ||||
Sbjct 33749 AATGACG--CCGCGAAGGAAGACGCGTTTGGTCGTCAGGAGAGGAA 33792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369504655596515
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |