Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022200
45.1_202017-07-17] 898 sequences; 18,619,184 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq1 87.8 3e-12
>seq1
Length=728537
Score = 87.8 bits (96), Expect = 3e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
|| || ||||| || || ||||| || |||||||| ||| | || || || || ||||||
Sbjct 455913 AAGATCCAAGACAAGGAGGGTATCCCCCCTGATCAGCAACGACTCATCTTCGCCGGAAAA 455972
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742
||| | || ||| | ||||| | ||||| ||||| ||||| || || || | |||
Sbjct 455973 CAACTTGAAGATGGCCGAACTCTTTCCGATTACAATATCCAAAAGGAGTCTACCCTCCAT 456032
Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768
| || || ||| | |||||||||||
Sbjct 456033 CTCGTCTTGCGTCTCCGAGGTGGTAT 456058
Score = 86.0 bits (94), Expect = 9e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || || || || |||||||| || || | || | ||| |
Sbjct 455041 ATGCAAATCTTCGTCAAAACCCTCACCGGCAAAACCATTACCCTTGAAGTCGAAAGCTCT 455100
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || ||| | || || || ||||| || || ||||| || ||||| ||
Sbjct 455101 GATACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCCCCTGACCAG 455160
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | | ||||| || ||||| ||| | || || | ||||| | ||||| |||
Sbjct 455161 CAGCGATTGATTTTCGCCGGAAAGCAACTTGAAGACGGCCGAACTCTTTCCGATTACAAT 455220
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|||||||| || || ||| | ||| | || || ||| | |||||||||||
Sbjct 455221 ATTCAAAAGGAGTCCACTCTCCATCTCGTCTTGCGTCTCCGAGGTGGTAT 455270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755447520006400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |