Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022200 45.1_202017-07-17] 898 sequences; 18,619,184 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 1e-15 >seq1 Length=728537 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/131 (78%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 13681 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13740 |||||||| || || || | |||||||||||||| | ||| |||||||| |||| || Sbjct 145688 CCCTCATCCCTGCTGATCAACTCGTTTGAAAATGTCAGTCCAGGCATCAACCCTCTCTTC 145747 Query 13741 tttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCA-GCAAA 13799 |||||||| || |||||||| || || || |||||||| || || || || ||| ||||| Sbjct 145748 TTTAACCAGAAGATTGCAGCAAAAGACCCAGAAAAGAAAATGCCTTCCAC-GCATGCAAA 145806 Query 13800 CGCTATTAGTC 13810 || | |||| Sbjct 145807 AGCCACCAGTC 145817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478583427840720