Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022200 45.1_202017-07-17] 898 sequences; 18,619,184 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1 109 4e-19 >seq1 Length=728537 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || | ||| || ||||| || ||||| || ||||||||| ||| ||| ||||| Sbjct 455252 AAGACGAGATGGAGAGTGGACTCCTTTTGAATATTGTAATCGGAAAGAGTTCGGCCGTCT 455193 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | ||| || || ||| | ||||| || || ||||| || || || || ||||| Sbjct 455192 TCAAGTTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCT 455133 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 || ||| ||| ||| | || |||||||| |||| || || | |||||||||| Sbjct 455132 TGGATCTTGGCCTTGACATTGTCGATGGTATCAGAGCTTTCGACTTCAAGGGTAATGGTT 455073 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || || ||||| || || ||||||||| Sbjct 455072 TTGCCGGTGAGGGTTTTGACGAAGATTTGCATA 455040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362175236175018