Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022200 45.1_202017-07-17] 898 sequences; 18,619,184 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq334 84.2 1e-11 >seq334 Length=594113 Score = 84.2 bits (92), Expect = 1e-11 Identities = 164/240 (68%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 25733 tttGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG-TCCGTGTACTCTGCT 25791 ||||||| || || || || | ||| |||||| || || || |||||||| || Sbjct 342812 TTTGCAGTTGGTCGACTCCTTTGCCCTTATAGTCT-CCGTCGGCATCAGTGTACTCGGCA 342754 Query 25792 CCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCA 25851 || |||| ||||| |||||||||||||| ||||| || || || || ||||| | Sbjct 342753 CCAAAATGTCTCCATTGGAACCCGTACACAGGTCCCAGATCACCTTCCCTTCTGTGGCCG 342694 Query 25852 AAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTC 25911 | || ||| |||| ||| ||| || || || | ||||||||| ||| |||| Sbjct 342693 AGCCCGACCTTCTCCAGAAATTCTTTGCTTCCGTTACCATCCCAGATCCCTACGCCCTGA 342634 Query 25912 TCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCGTGACG 25971 |||||| | |||| || || | || |||||||||| ||||| || ||||| Sbjct 342633 CTAGAGAGCACCTTGGCGTCGGTACAGCCAGAAACGAACCACAAAAGCTCGGCAATGACG 342574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340133877406554