Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022200
45.1_202017-07-17] 898 sequences; 18,619,184 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq334 84.2 1e-11
>seq334
Length=594113
Score = 84.2 bits (92), Expect = 1e-11
Identities = 164/240 (68%), Gaps = 2/240 (1%)
Strand=Plus/Minus
Query 25733 tttGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG-TCCGTGTACTCTGCT 25791
||||||| || || || || | ||| |||||| || || || |||||||| ||
Sbjct 342812 TTTGCAGTTGGTCGACTCCTTTGCCCTTATAGTCT-CCGTCGGCATCAGTGTACTCGGCA 342754
Query 25792 CCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCA 25851
|| |||| ||||| |||||||||||||| ||||| || || || || ||||| |
Sbjct 342753 CCAAAATGTCTCCATTGGAACCCGTACACAGGTCCCAGATCACCTTCCCTTCTGTGGCCG 342694
Query 25852 AAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTC 25911
| || ||| |||| ||| ||| || || || | ||||||||| ||| ||||
Sbjct 342693 AGCCCGACCTTCTCCAGAAATTCTTTGCTTCCGTTACCATCCCAGATCCCTACGCCCTGA 342634
Query 25912 TCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCGTGACG 25971
|||||| | |||| || || | || |||||||||| ||||| || |||||
Sbjct 342633 CTAGAGAGCACCTTGGCGTCGGTACAGCCAGAAACGAACCACAAAAGCTCGGCAATGACG 342574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340133877406554
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |