Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022200
45.1_202017-07-17] 898 sequences; 18,619,184 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq1 84.2 2e-11
>seq1
Length=728537
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCC 48574
|| || | ||| || ||| |||||||||||| |||||||| | | ||| ||||
Sbjct 455252 AAGACGAGATGGAGAGTGGACTCCTTTTGAATATTGTAATCGGAAAGAGTTCGGCCGTCT 455193
Query 48575 TCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCC 48634
|| || ||||| ||| || |||| || |||||||| || || | || ||||||||
Sbjct 455192 TCAAGTTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCT 455133
Query 48635 ATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC-TCGACTGTTATGGT 48693
|| || ||||| | | |||||||| | || | || | || | || |||||
Sbjct 455132 TGGATCTTGGCCTTGACATTGTCGATGGTATCAG-AGCTTTCGACTTCAAGGGTAATGGT 455074
Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| |||||||| ||||| || || || |||||
Sbjct 455073 TTTGCCGGTGAGGGTTTTGACGAAGATTTGCAT 455041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421246589668898
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |