Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022200 45.1_202017-07-17] 898 sequences; 18,619,184 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=728537 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCC 48574 || || | ||| || ||| |||||||||||| |||||||| | | ||| |||| Sbjct 455252 AAGACGAGATGGAGAGTGGACTCCTTTTGAATATTGTAATCGGAAAGAGTTCGGCCGTCT 455193 Query 48575 TCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCC 48634 || || ||||| ||| || |||| || |||||||| || || | || |||||||| Sbjct 455192 TCAAGTTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCT 455133 Query 48635 ATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC-TCGACTGTTATGGT 48693 || || ||||| | | |||||||| | || | || | || | || ||||| Sbjct 455132 TGGATCTTGGCCTTGACATTGTCGATGGTATCAG-AGCTTTCGACTTCAAGGGTAATGGT 455074 Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| |||||||| ||||| || || || ||||| Sbjct 455073 TTTGCCGGTGAGGGTTTTGACGAAGATTTGCAT 455041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421246589668898