Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022200
45.1_202017-07-17] 898 sequences; 18,619,184 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq1 132 4e-26
>seq1
Length=728537
Score = 132 bits (146), Expect = 4e-26
Identities = 150/199 (75%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTC 94868
||||| |||||||| | ||| || ||| | || || || |||||| || ||||| |
Sbjct 455744 GTAGACTCCTTTTGGATGTTGTAGTCGG--AAAGAGTACGACCATCCTCAAGTTGTTTAC 455687
Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928
| |||| || |||| ||||||||| |||||||||||||| ||||| | ||| || ||||
Sbjct 455686 CAGCAAAAATCAATCGTTGCTGATCAGGAGGAATACCTTCCTTGTCCTGAATCTTCGCCT 455627
Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988
| ||| | | | |||||||| ||||| |||| ||||| || ||||| || | ||
Sbjct 455626 TAACGTTGTCTATAGTGTCAGACGACTCGACTTCAAGAGTGATAGTCTTTCCGGTCAAAG 455567
Query 94989 TTTTCACAAAGATCTGCAT 95007
| || ||||||||||||||
Sbjct 455566 TCTTGACAAAGATCTGCAT 455548
Score = 114 bits (126), Expect = 1e-20
Identities = 119/156 (76%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
||||||||| || |||||| | ||||| |||| ||| || || ||||| ||||| || ||
Sbjct 455424 ATCCTCCAGTTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGAGGGATACCCTCCTT 455365
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | ||| || |||||||| | | | ||||||| | || || |||| |||||
Sbjct 455364 GTCCTGAATCTTCGCCTTGACATTGTCAATGGTGTCAGAGGATTCAACCTCAAGAGTGAT 455305
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| ||||| ||||||||||| || || ||||||||
Sbjct 455304 AGTCTTTCCGGTAAGAGTTTTGACGAAAATCTGCAT 455269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448286167931280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |