Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022200
45.1_202017-07-17] 898 sequences; 18,619,184 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq334 134 1e-26
>seq334
Length=594113
Score = 134 bits (148), Expect = 1e-26
Identities = 240/346 (69%), Gaps = 6/346 (2%)
Strand=Plus/Minus
Query 30043 TTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCC 30102
|| |||||||| || | | ||| || |||||||| ||| |||||| ||||| |||
Sbjct 342879 TTTGGGTTCCAAGCTGATAAGATAATCCGCCTGTCAGTTGGATTGTTCTTGATGGTGTCG 342820
Query 30103 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG-TCCGTGTA 30161
| | ||||||| || || || || | ||| |||||| || || || |||||
Sbjct 342819 ATTACCCTTTGCAGTTGGTCGACTCCTTTGCCCTTATAGTCT-CCGTCGGCATCAGTGTA 342761
Query 30162 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30221
||| || || ||||| ||||| |||||||||||||| |||||||| || || || ||
Sbjct 342760 CTCGGCACCAAAATGTCTCCATTGGAACCCGTACACAGGTCCCAGATCACCTTCCCTTCT 342701
Query 30222 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30281
||| ||| || ||| |||| ||| ||| || ||||| | ||||||||| |||
Sbjct 342700 GTGGCCGAGCCCGACCTTCTCCAGAAATTCTTTGCTTCCGTTACCATCCCAGATCCCTAC 342641
Query 30282 CCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30341
|||| |||||| | |||| || || | || |||||||||| ||||| |
Sbjct 342640 GCCCTGACTAGAGAGCACCTTGGCGTCGGTACAGCCAGAAACGAACCACAAAAGCTCGGC 342581
Query 30342 CACGACGGCCTTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGGAA 30385
| |||| | | || ||||| | |||||||| ||||| ||||
Sbjct 342580 AATGACG--CCGCGAAGGAAGACGCGTTTGGTCGTCAGGAGAGGAA 342537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408613127935754
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |