Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022200 45.1_202017-07-17] 898 sequences; 18,619,184 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 2e-14 >seq1 Length=728537 Score = 98.7 bits (108), Expect = 2e-14 Identities = 125/170 (74%), Gaps = 4/170 (2%) Strand=Plus/Plus Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984 |||||||||||||| |||||| | ||| ||||||| |||||| | || |||||||| Sbjct 440502 CTCGAAAAAGTTGGCCTTGCCTTGGAGAGAGATCATCTCCATAAAGTCAAAGGGGTTGGC 440561 Query 793985 CGTCAGGT--AGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCA 794042 | || | | ||||||| || | | |||| || |||||||| || || ||| Sbjct 440562 AG--AGTTCCAAATCTTCTCGTTGCCCAAAGCAACAAGAAGACGGTCGGCAACAAACTCA 440619 Query 794043 ATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAG 794092 ||||| ||||||||||| ||||||||| ||||| || | ||||| || Sbjct 440620 ATGTATTGGCACATGAGCTTGGCGTTCATACCGATAAGAGAGACGGGGAG 440669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916150875644222