Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022200
45.1_202017-07-17] 898 sequences; 18,619,184 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 8e-15
>seq1
Length=728537
Score = 96.9 bits (106), Expect = 8e-15
Identities = 146/208 (70%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| ||||| || ||||| || || | ||||| ||||| ||||| || ||||
Sbjct 455055 CAAAACCCTCACCGGCAAAACCATTACCCTTGAAGTCGAAAGCTCTGATACCATCGACAA 455114
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| ||||| || || || || || ||| || || | || ||
Sbjct 455115 TGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCCCCTGACCAGCAGCGATTGATTTT 455174
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|||||||||||| | ||||| || | ||| | |||||||||| | || || |||||
Sbjct 455175 CGCCGGAAAGCAACTTGAAGACGGCCGAACTCTTTCCGATTACAATATTCAAAAGGAGTC 455234
Query 206364 TACTCTTCACCTTGTTTTGAGACTTCGA 206391
||||| || || || ||| | || |||
Sbjct 455235 CACTCTCCATCTCGTCTTGCGTCTCCGA 455262
Score = 89.7 bits (98), Expect = 1e-12
Identities = 144/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || | || ||||| || |||||| | ||||| || ||||||
Sbjct 455551 CAGATCTTTGTCAAGACTTTGACCGGAAAGACTATCACTCTTGAAGTCGAGTCGTCTGAC 455610
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| |||||||| || || ||||| ||| || || |||
Sbjct 455611 ACTATAGACAACGTTAAGGCGAAGATTCAGGACAAGGAAGGTATTCCTCCTGATCAGCAA 455670
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | || || || || || || | || ||||| | ||| | |||| |||||| ||
Sbjct 455671 CGATTGATTTTTGCTGGTAAACAACTTGAGGATGGTCGTACTCTTTCCGACTACAACATC 455730
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379
|| || |||||||| ||||||||||||
Sbjct 455731 CAAAAGGAGTCTACCCTTCACCTTGTT 455757
Score = 86.0 bits (94), Expect = 1e-11
Identities = 124/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || |||||| || || ||||| || |||||| | || || ||| ||||||
Sbjct 455272 CAGATTTTCGTCAAAACTCTTACCGGAAAGACTATCACTCTTGAGGTTGAATCCTCTGAC 455331
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| |||||||| || || || || || || ||| |||
Sbjct 455332 ACCATTGACAATGTCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAACAA 455391
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACA 206347
|| | ||||||||||||||||| |||| ||||| | |||||| | |||||||
Sbjct 455392 CGATTGATCTTCGCCGGAAAGCAACTGGAGGATGGTCGAACTTTGTCTGATTACA 455446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181807202413058
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |