Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022200
45.1_202017-07-17] 898 sequences; 18,619,184 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 7e-17
>seq1
Length=728537
Score = 102 bits (112), Expect = 7e-17
Identities = 128/176 (73%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 25211 ATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGAT 25270
||||| | ||||||||| | | |||||| ||||| | || || || || ||
Sbjct 455865 ATCACTCTTGAAGTCGAATCGAGCGATACCATCGACAATGTCAAGGCCAAGATCCAAGAC 455924
Query 25271 AAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT 25330
|| |||||||| || || ||||||||| ||||||| | || ||| |||||||| ||||||
Sbjct 455925 AAGGAGGGTATCCCCCCTGATCAGCAACGACTCATCTTCGCCGGAAAACAACTTGAAGAT 455984
Query 25331 GATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386
| ||| | | |||||||||||| ||||| || || ||| | ||| | || ||
Sbjct 455985 GGCCGAACTCTTTCCGATTACAATATCCAAAAGGAGTCTACCCTCCATCTCGTCTT 456040
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || ||||| | ||||| ||| | || || | ||||||||| |
Sbjct 455041 ATGCAAATCTTCGTCAAAACCCTCACCGGCAAAACCATTACCCTTGAAGTCGAAAGCTCT 455100
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| ||||| | || || || || || || |||||||| || || || |||
Sbjct 455101 GATACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCCCCTGACCAG 455160
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| || | |||| || ||| || ||||| ||||| | ||| | | ||||||||||
Sbjct 455161 CAGCGATTGATTTTCGCCGGAAAGCAACTTGAAGACGGCCGAACTCTTTCCGATTACAAT 455220
Query 25355 ATTCAAAAAGAATCCAC 25371
|||||||| || |||||
Sbjct 455221 ATTCAAAAGGAGTCCAC 455237
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445089403815360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |