Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220
15.1_202017-07-20] 494 sequences; 18,606,003 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq126 167 3e-36
seq328 122 1e-22
seq157 105 8e-18
>seq126
Length=110913
Score = 167 bits (184), Expect = 3e-36
Identities = 713/1116 (64%), Gaps = 27/1116 (2%)
Strand=Plus/Minus
Query 114103 CCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGG 114162
|||||| || |||| |||||||| | ||| || || || || | | || || |
Sbjct 98489 CCACATGTCGTACTGAAGGATACCCTTAGAGATGGGAGAACCTTCGTAAGATTCATAGGT 98430
Query 114163 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAA 114222
|| |||| || | |||| | |||||| || || ||||| || || ||||| ||
Sbjct 98429 ACCAAACTCCTCGGCAAGTTCGCATGACGCCTCAAGCGCCGCGTGGTATATCGTCTCGAA 98370
Query 114223 AATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAA 114282
|| | ||| | | || | ||||| |||| || |||| | || || ||
Sbjct 98369 GATCTGGATATTGAGTTCCCTAGCCTCAGCGGAGTCGAACGGCATGCGAAGGGCCATGAA 98310
Query 114283 TACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCG 114342
| || || ||||| |||||||| || |||| || ||||| | ||| || || || ||
Sbjct 98309 AGCGTCGGCAAGACCCTGGACACCAAGACCAACAGGCCGATGGCGCATGTTGGAGTTGCG 98250
Query 114343 AGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGAC 114399
|| ||| ||| ||||| | || | ||| || | | || || || || ||
Sbjct 98249 GGC---CTCAGGCACTGGATAGTAGTTACGGGTGATTACAGTGTCAAGGTTCTTTGTAAC 98193
Query 114400 AACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATA 114459
|||||| || || || || ||||||| | | ||| | |||| || | || |
Sbjct 98192 AACCTTGGTAATCTCGTGCAGCTTTTTGAAGTCATAGACGCGACGTTCCAGGTCTACGAA 98133
Query 114460 CTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTC 114519
|||||| || | || || |||||||| |||| ||||| | || |||||
Sbjct 98132 GGCAGGAAGAGCAAGAGAAGCAAGATTACAGACAGCAACTTCATCAGGAGAAGAATACTC 98073
Query 114520 TATAATTTCCGTACACAAATT--TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGAC 114577
|| ||||| ||||| | || || | | | ||||| || | || |||||| || |||
Sbjct 98072 CATGATTTCAGTACAGAGGTTACTGGATT--TGATGGTACCAAGGTGCTTTTGGTTGGAC 98015
Query 114578 TTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTG 114637
|| | ||| ||||||||||| ||||| || || ||||| ||||| | || |
Sbjct 98014 TTGGAGTTGGCAGCATCCTTGTAGCAGATGTAAGGGACACCAGTCTCGGTTTGAGCCTCG 97955
Query 114638 AGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGG-CGTTGGCTCGCCCCTCCTCCT 114695
|| || || ||| | | || | |||| | ||| | || || |||| |||| |
Sbjct 97954 AGGATGGCGAACCAAAGCTTCTG-GGCTTTGATAGTTTTCCTTCCCTTGCCCTGCCTC-T 97897
Query 114696 CGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCT 114755
|||| | || || |||||| |||||||| | || | || || || ||
Sbjct 97896 CGTAGCTCTCATAAAGCTTTTCAAATTCTTCACCGTAAACGTCGGCAAGTCCAGGGCACT 97837
Query 114756 TATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTG 114815
| || || | |||| ||| | ||| | || |||||||||||||| || || |
Sbjct 97836 CGGCGGGACACATAAGAGTCCAATCCCCATCGGATTCGACACGCTTCATGAAAAGATCGG 97777
Query 114816 GGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGAC 114875
||||||||| || |||| ||||| ||| || | || || | || || || |
Sbjct 97776 AGATCCAGAGGGCGTAGAAAAGATCACGAGCTCGTACCTCCTCCTTACCATGGTTCTTCC 97717
Query 114876 GCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACC 114935
|| || | ||||| | | ||| |||||||| || || || || | |||| | |
Sbjct 97716 TTAAGTCAATGAAGTCAAATACATCAGCGTGCCAAGGCTCAAGATAGATGGCGAAGGCAC 97657
Query 114936 CCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAA 114989
| | |||| |||| | || | || || | |||||||| | | | || |
Sbjct 97656 C---AGGACGCTTGTTACCACCTTGATCAACGTATCGAGCTGTGGCGTCGTAAGCTCGGA 97600
Query 114990 GCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGC 115047
|||| |||||||| || | || | ||||| || || || || ||| | || ||
Sbjct 97599 GCATAGGAATGATGCCGTTGGAGTAACCATTGGTACCGGCAATGTAGGAGCC--CTTCGC 97542
Query 115048 TCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTC 115107
| || || || ||||| | ||||||||| || || ||| ||||| || || ||
Sbjct 97541 ACGGATATTGTGAATGTGAAGACCAATACCACCGGCAGTCTTGGAGATCTGAGCACAGGT 97482
Query 115108 CGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCT 115167
| ||||| | ||||||| || || || |||||| |||| | || | ||||||||
Sbjct 97481 CTTGAGAGTATCGTAGATACCATCAATGGAGTCATCCTTCATGGCCACGAGGAAGCATGA 97422
Query 115168 CGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAG 115203
|||||||| || | || ||||| |||||||| ||
Sbjct 97421 TGACATTTGGGGTCGGGGAGTACCGGCGTTGAAAAG 97386
>seq328
Length=35194
Score = 122 bits (134), Expect = 1e-22
Identities = 121/154 (79%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
|||||| || ||||||||||||||| || |||||||| || || |||||| || ||
Sbjct 19002 GGCAAAGTCGGTGTGGAGACCCTCGTCTCGAGAGATGAGCTCGTTAGAGAAGGTAAGACC 19061
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCG-CACAAAATGAACCCGAGAAGAAGA 126164
||||||||||| |||||||| | |||||| || | | | ||| ||||| ||||||||||
Sbjct 19062 AGGCATGAGACCTCGCTTCTTAAGCCAGAAGATGGACGCGAAA-GAACCAGAGAAGAAGA 19120
Query 126165 TTCCCTCCACACACGCGAACGCAAAGAGACGCTC 126198
| |||||||| || || |||| ||| |||||
Sbjct 19121 TACCCTCCACGGCAGCAAAAGCAATGAGTCGCTC 19154
>seq157
Length=78573
Score = 105 bits (116), Expect = 8e-18
Identities = 285/428 (67%), Gaps = 6/428 (1%)
Strand=Plus/Plus
Query 171727 ACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAA 171786
||| || || ||||| || | || || | | |||||||||| || ||||| | |
Sbjct 70474 ACCAGTACCGATACCATCTGCACCATTGATCAATACCATTGGAACGGTGGGCATGAAATA 70533
Query 171787 GTCTGGTTCAAT-CGCACGCCCATCATCATCCAAATAGTTGAGCACGGGGTCGTCCCTCG 171845
||||||||||| |||| || ||| || |||| |||||||||| ||| || |
Sbjct 70534 ATCTGGTTCAATGCGCATACC-ATCCTCGACCAAGTAGTTGAGCAACCCGTCATCTGCAG 70592
Query 171846 GATCAAAGATTTTACGAG-CATCCTTGGTGAGTTTTGTGAAGATGTACCTCGTTTGAGAC 171904
| | |||||| |||| ||||| ||| || ||||||||||| || | | ||
Sbjct 70593 GGTGGAAGATTGCTCGAGTCATCCGTGGA-AGGTTTGTGAAGATATAACGGGCAGAAGCT 70651
Query 171905 GCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTGATA 171964
|| ||||| ||||| ||||| || |||||||| || || || || ||||||||
Sbjct 70652 GCGTCTTTACCACCTGCAAGACGAGTACCAAATTGGCCGTTGGGATCCAGCAGATTGATG 70711
Query 171965 TTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCA 172024
||||| || | | ||| | || || |||||| || | | | |||||
Sbjct 70712 TTGTTACTGCCGACGAAGTTTTGTGCTAAGCCGACAATGGTGGAAGTCAAACTGGCTTCA 70771
Query 172025 CCGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAA-CTGTGCCACCTTCATCTC 172083
|| || || || || | || |||| || || |||| ||| ||| || ||||| || ||
Sbjct 70772 CCATGGTGATATGCGGTTTTCTCCGAAACGTA-GCCGGCAAGCTGAGCGACCTTGATTTC 70830
Query 172084 ATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCC 172143
| ||||||| | ||| || || | | ||||||| ||| ||| ||||| ||
Sbjct 70831 TTTGGTGAGGTTTCGCTTGAAACAACCAAAGAGAACCTTTCGCTGACCAGGTTTGAGACC 70890
Query 172144 GTCGGCCA 172151
||||||||
Sbjct 70891 GTCGGCCA 70898
Score = 102 bits (112), Expect = 1e-16
Identities = 139/192 (72%), Gaps = 4/192 (2%)
Strand=Plus/Plus
Query 172777 AGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACC 172836
||| ||||| ||||| | || || | ||||||||| || || || | |||||| ||
Sbjct 71624 AGCTTCGCGAACATTGAGAAGTTTACCCCTGAGAGGGAAAACGCCATACTCATCACGTCC 71683
Query 172837 AACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAG 172896
|| || | |||||||| ||| ||||| | || || ||||| || ||||||| ||||||
Sbjct 71684 GACAACTGCAAGACCAGAAACGGCGAGAGCTTTGGCAGAATCTCCTTCCGTCAGGATGAG 71743
Query 172897 CGTACACTT--TCCAGATTGTGCCGTCCCCGCCTTGTTCGCATCGTCCAACTTGGGAATA 172954
|| || || | || || |||| || || ||||||||||| || | ||| ||||
Sbjct 71744 AGTGCAGTTCTTGGAGTTTCGGCCG--CCAGCATTGTTCGCATCTTCAAGCTTTACAATA 71801
Query 172955 CCAGTAATTTTG 172966
|||| |||| ||
Sbjct 71802 CCAGAAATTCTG 71813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597349911341520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |