Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220
15.1_202017-07-20] 494 sequences; 18,606,003 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq126 203 3e-47
>seq126
Length=110913
Score = 203 bits (224), Expect = 3e-47
Identities = 480/725 (66%), Gaps = 0/725 (0%)
Strand=Plus/Plus
Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAG 93963
|| |||||||| || || || || || ||||| || || ||||| || | | |||
Sbjct 97386 CTTTTCAACGCCGGTACTCCCCGACCCCAAATGTCATCATGCTTCCTCGTGGCCATGAAG 97445
Query 93964 GCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATAC 94023
| |||||||| || || | ||| | |||||| |||||| ||||| ||
Sbjct 97446 GATGACTCCATTGATGGTATCTACGATACTCTCAAGACCTGTGCTCAGATCTCCAAGACT 97505
Query 94024 GCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGT 94083
|| || || || || | | ||| | | ||||| | ||| |||||||| ||||
Sbjct 97506 GCCGGTGGTATTGGTCTTCACATTCACAATATCCGTGCGAAGGGCTCCTACATTGCCGGT 97565
Query 94084 ACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGC 94143
|||||||| |||||||||| || | ||||||||||| | | | || | | || ||
Sbjct 97566 ACCAATGGTTACTCCAACGGCATCATTCCTATGCTCCGAGCTTACGACGCCACAGCTCGA 97625
Query 94144 TACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGG 94203
||||| || || |||||| | | | ||| | ||||| ||||||| ||||| |||
Sbjct 97626 TACGTTGATCAAGGTGGTAACAAGCGTCCTGGTGCCTTCGCCATCTATCTTGAGCCTTGG 97685
Query 94204 CACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGG 94263
||||| || || | ||||| ||| | | |||||||| || || || || |
Sbjct 97686 CACGCTGATGTATTTGACTTCATTGACTTAAGGAAGAACCATGGTAAGGAGGAGGTACGA 97745
Query 94264 GCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAA 94323
|| | || || |||||||| |||||| | | || ||||| ||||| || |||||
Sbjct 97746 GCTCGTGATCTTTTCTACGCCCTCTGGATCTCCGATCTTTTCATGAAGCGTGTCGAATCC 97805
Query 94324 AACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGA 94383
| | |||| |||| | |||||| || || || ||||| ||||||||| ||
Sbjct 97806 GATGGGGATTGGACTCTTATGTGTCCCGCCGAGTGCCCTGGACTTGCCGACGTTTACGGT 97865
Query 94384 TCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTTATG 94443
|||||| | | |||| | ||||| ||||||||||| ||||| |||
Sbjct 97866 GAAGAATTTGAAAAGCTTTATGAGAGCTACGAGAGGCAGGGCAAGGGAAGGAAAACTATC 97925
Query 94444 GATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTAC 94503
| || |||||| ||| ||| | || | || ||||| ||| || |||
Sbjct 97926 AAAGCCCAGAAGCTTTGGTTCGCCATCCTCGAGGCTCAAACCGAGACTGGTGTCCCTTAC 97985
Query 94504 ATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAG 94563
|||| | |||||| ||| |||| ||||||||||||| ||||||| || |||||
Sbjct 97986 ATCTGCTACAAGGATGCTGCCAACTCCAAGTCCAACCAAAAGCACCTTGGTACCATCAAA 98045
Query 94564 AGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGT 94623
| || || || || || || | |||||| ||||||| || || ||||||| |||
Sbjct 98046 TCCAGTAACCTCTGTACTGAAATCATGGAGTATTCTTCTCCTGATGAAGTTGCTGTCTGT 98105
Query 94624 AACCT 94628
|| ||
Sbjct 98106 AATCT 98110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494720145084240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |