Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220
15.1_202017-07-20] 494 sequences; 18,606,003 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq296 87.8 1e-11
seq129 86.0 5e-11
>seq296
Length=56937
Score = 87.8 bits (96), Expect = 1e-11
Identities = 140/199 (70%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 518444 ATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG--TCATTAAAATCTC 518501
|| || || || ||||| | ||||| || | ||||| || || || ||||| | |
Sbjct 391 ATTACCTTGAAAGGCCAATGCTTCATGTCGGCCTGAAC--TTCGGCATCGTTAAATTTAC 448
Query 518502 TACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATT 518561
|| || || || || ||||| |||| ||| ||| ||||| |||||| |||| | |
Sbjct 449 GGCCGATCAACCGCTTAGCATCGAAAACAGTGTTGTAAGGATTCATTGCAACTTGGTTCT 508
Query 518562 TGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGC 518621
| || ||||| || || || |||| | || | || | |||||||||||| ||||| |
Sbjct 509 TCGCGGCATCACCGATAAGTCGTTCAGAGTCATTGAAAGCAACATATGATGGTGTTGTTC 568
Query 518622 GATTACCTTGATCATTCGC 518640
|||| || ||||| || ||
Sbjct 569 GATTGCCCTGATCGTTGGC 587
>seq129
Length=49039
Score = 86.0 bits (94), Expect = 5e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 668846 AGATTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATG 668905
|| |||| ||| |||||||||||||| ||||| ||| |||||||||| |||||||| |
Sbjct 34306 AGGTTAAAAGGAAAAGAAGGTCGTATGAGAGGTAATCTGATGGGAAAGCGTGTCGACTTT 34365
Query 668906 TCTGCACGTACAGTTATTACTTCTGATCCCAA 668937
|| || || || |||||||| ||| |||||
Sbjct 34366 TCAGCGCGAACGGTTATTACCGGTGACCCCAA 34397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780797886092764
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |