Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220
15.1_202017-07-20] 494 sequences; 18,606,003 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq267 129 5e-25
>seq267
Length=62262
Score = 129 bits (142), Expect = 5e-25
Identities = 239/346 (69%), Gaps = 6/346 (2%)
Strand=Plus/Plus
Query 30043 TTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCC 30102
|| |||||||| || | | ||| || |||||||| ||| |||||| ||||| |||
Sbjct 23959 TTTGGGTTCCAAGCCGATAAGATAATCCGCCTGTCAGTTGGATTGTTCTTGATGGTGTCG 24018
Query 30103 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG-TCCGTGTA 30161
| | ||||||| || || || || | || ||||| ||| || || |||||
Sbjct 24019 ATTACCCTTTGCAGTTGGTCGACTCCTTTGTCCTTATAGTC-GCCGTCGGCATCAGTGTA 24077
Query 30162 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30221
||| || || ||||| |||||||||||||||||||| |||||||| || || || ||
Sbjct 24078 CTCGGCACCAAAATGTCTCCACTGGAACCCGTACACAGGTCCCAGATCACCTTCCCTTCT 24137
Query 30222 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30281
||| ||| || ||| |||| || ||| || ||||| | ||||||||| |||
Sbjct 24138 GTGGCCGAGCCCGACCTTCTCCAGGAATTCTTTGCTTCCGTTACCATCCCAGATCCCTAC 24197
Query 30282 CCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30341
|||| |||||| | |||| || || | || |||||||||| ||||| |
Sbjct 24198 GCCCTGACTAGAGAGCACCTTGGCGTCGGTACAACCAGAAACGAACCACAAAAGCTCGGC 24257
Query 30342 CACGACGGCCTTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGGAA 30385
| |||| | | || ||||| | |||||||| ||||| ||||
Sbjct 24258 AATGACG--CCGCGAAGGAAGACGCGTTTGGTCGTCAGGAGAGGAA 24301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408615139866662
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |