Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220 15.1_202017-07-20] 494 sequences; 18,606,003 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq292 266 4e-66 seq328 221 2e-52 seq126 196 6e-45 seq135 187 3e-42 seq296 156 6e-33 seq293 154 2e-32 seq157 116 5e-21 seq480 113 6e-20 seq34 109 7e-19 seq384 95.1 2e-14 >seq292 Length=117765 Score = 266 bits (294), Expect = 4e-66 Identities = 649/987 (66%), Gaps = 66/987 (7%) Strand=Plus/Plus Query 195630 CTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCA 195689 ||||||||||||| || || ||||| | || ||||||||||||||||| || ||| | Sbjct 116782 CTCCCGAAGAAATCTCTTCCATGGTCCTTATCAAGATGAAGGAGACTGCTGAGGCTTACC 116841 Query 195690 TGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAAC 195749 | ||| || || | || ||||| || || || || ||||||| || || |||| Sbjct 116842 TTGGTGGCACCGTCTCCAAGGCCGTTGTCACCGTCCCCGCCTACTTCAACGACTCTCAAC 116901 Query 195750 GACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAAT 195808 | ||||| || |||||||||| ||| ||||| ||||| | ||| || | || ||||| Sbjct 116902 GTCAGGCTACCAAGGACGCTGGTGCCATTGCCGGTCTCGA-TGTCCTCCGTATCATCAAC 116960 Query 195809 GAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAAT 195868 || || || || ||||| || ||||| ||||| |||||||| || | || || || Sbjct 116961 GAGCCTACTGCCGCTGCTATCGCTTACGGTCTTGACAAGAAGTCTGAGGGTGAGAAGAAC 117020 Query 195869 GTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGT 195928 || |||||||| || || ||||||||||| || |||||||| ||| | | |||||| | Sbjct 117021 GTTTTGATCTTCGACCTTGGTGGTGGTACTTTCGATGTCTCTCTTTTGACTATTGAGGAG 117080 Query 195929 GGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 ||||| ||||| || |||||||| |||||||| ||||| || |||||||| || || || Sbjct 117081 GGTATCTTCGAGGTCAAGGCTACCGCTGGTGACACTCACCTTGGTGGTGAGGACTTTGAC 117140 Query 195989 GCACGTCTTCTCCGTCA-TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTC 196047 || ||| || || || ||| | |||||| | ||||| ||||| | || || Sbjct 117141 AACCGACTTGTCAACCACTTCGTC-CAAGAGTTCAAGAGGAAGAACAAGAAGGGTAAGTC 117199 Query 196048 ---------------TGGA------AATCCT----------------------------- 196057 |||| ||| || Sbjct 117200 ACCTACGATTACTCATGGACGCGTCAATGCTGATCTGCTGTAGACCTTTCTTCTAACGCC 117259 Query 196058 AGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACG 196117 | ||||| || || || | || || ||||| || || || |||||||| ||||| | Sbjct 117260 CGAGCTCTCCGACGACTCCGAACCGCCTGTGAGCGAGCTAAGCGAACTCTTTCTTCCGCT 117319 Query 196118 GCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATT 196177 || || || ||||||| || || | || ||||| || |||||||| || | || Sbjct 117320 GCCCAGACTTCTATTGAGATCGACTCTCTCTTCGACGGTATCGACTTCTACACTTCCATC 117379 Query 196178 ACCCGTGCACGTTTTGAAGAGTTAAACTCT---GATTTGTTTAGGAAGTGTATGGAACCT 196234 |||||||| || || || ||| | || | || | || | ||||| || Sbjct 117380 ACCCGTGCCCGATTCGAGGAGCT---CTGTCAGGACCTCTTCCGATCCACCATGGACCCC 117436 Query 196235 GTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTT 196294 || || | || || || ||| | ||||| || ||||| ||| | || || |||||| Sbjct 117437 GTCGAGAAGGTTCTCCGAGACTCCAAGATCGACAAGTCCTCCGTTAACGAGATCGTCCTT 117496 Query 196295 GTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAAT 196354 || || || || |||||||| || ||||| || || | |||| | | ||| | Sbjct 117497 GTCGGTGGTTCCACCCGTATCCCCAAGATCCAGAAGCTTGTTTCCGACATGTTCTCTGGC 117556 Query 196355 AAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAG 196414 ||| |||| | |||||||| || || || || || |||||||| ||||| ||| Sbjct 117557 CGAGAGCCCAACAGGTCCATCAACCCCGACGAGGCTGTCGCCTATGGTGCCGCCGTCCAG 117616 Query 196415 GCTGCTATTCTCTCAGGTGTTGACAATAATAACGTC---CAAGATCTTCTGCTACTTGAT 196471 |||||||| || | || ||||| | | | | | || || | || | || || Sbjct 117617 GCTGCTATCCTTAC---TGGTGACACTTCTGAGGCCACTCAGGACTTGCTCTTGCTCGAC 117673 Query 196472 GTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGAT 196531 ||||| || | ||| ||||| | || || || |||||| | ||||| | || | Sbjct 117674 GTTGCTCCTCTTTCCATGGGTATCGAGACTGCTGGTGGTATCATGACCCCCTTGATCAAG 117733 Query 196532 AGGAACACAACTATTCCGACTAAGAAG 196558 |||||||| ||| | || || |||||| Sbjct 117734 AGGAACACCACTGTCCCCACCAAGAAG 117760 >seq328 Length=35194 Score = 221 bits (244), Expect = 2e-52 Identities = 187/230 (81%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| |||||||| || || | || ||||| |||||||| ||||| || ||||||| Sbjct 33692 GTATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACTATCACTCTCGAAGTCGAGTCGT 33751 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | ||||| ||||| ||| | || || |||||||| || |||||||| ||||| || |||| Sbjct 33752 CTGACACTATCGACAACGTTAAGGCGAAGATTCAGGACAAGGAAGGTATTCCTCCTGATC 33811 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||||||| | ||||||||||||||||| ||||| ||||| ||||| || | || |||| Sbjct 33812 AGCAACGATTGATTTTTGCTGGTAAACAACTTGAGGATGGTCGTACTCTTTCCGACTACA 33871 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || | |||||||| ||||| || ||||||||||| | || || |||||| Sbjct 33872 ACATCCAAAAGGAATCTACCCTTCACCTTGTTCTCCGTCTGCGTGGTGGT 33921 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||||||||| || |||||||| || || ||||| || ||||| || || || ||| Sbjct 33185 GTATGCAAATCTTCGTCAAAACCCTCACCGGCAAAACCATTACCCTTGAAGTCGAATCGA 33244 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 || || ||||| || |||| |||||||| ||||| ||||| || || || || || | Sbjct 33245 GCGATACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCTCCTGACC 33304 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||| ||| | ||||| || || || || |||||||| || || || || | ||||||| Sbjct 33305 AGCAGCGATTGATTTTCGCCGGAAAGCAACTTGAAGACGGCCGAACTCTTTCCGATTACA 33364 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | | ||||||||||| ||||| || || || | | || || |||||| Sbjct 33365 ATATCCAAAAGGAGTCCACTCTCCATCTCGTCTTGCGTCTCCGAGGTGGT 33414 Score = 152 bits (168), Expect = 7e-32 Identities = 158/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 171883 CTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAA 171942 ||||| || || || ||||| || || || || ||| || || ||||| ||| |||| Sbjct 33996 CTTACGGGTAAGACAATCACTCTTGAAGTCGAATCGAGCGATACCATCGACAACGTCAAG 34055 Query 171943 GCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGT 172002 |||||||| ||||| ||||| || || || || |||||||||||||| || || || || Sbjct 34056 GCCAAGATCCAAGACAAGGAGGGTATCCCCCCTGATCAGCAACGACTCATCTTCGCCGGA 34115 Query 172003 AAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTA 172062 ||||| ||||||||||| || || || | |||||||| ||||||||||||| ||||| Sbjct 34116 AAACAACTTGAAGATGGCCGAACTCTTTCCGATTACAATATTCAAAAGGAGTCCACTCTC 34175 Query 172063 CACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | | || || |||||| Sbjct 34176 CATCTCGTCTTGCGTCTCCGAGGTGGT 34202 Score = 141 bits (156), Expect = 1e-28 Identities = 138/178 (78%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || || || || || || || || |||||||| || || || ||||| || Sbjct 32908 ATGCAAATTTTCGTCAAGACTCTCACCGGTAAGACTATCACTCTTGAAGTGGAGTCTTCC 32967 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| |||||||| || || ||||| || || || || || ||| Sbjct 32968 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAG 33027 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||||| | || ||||||||||| |||||||||||||| | || ||| | || |||| Sbjct 33028 CAACGATTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCAGGACTCTCTCCGACTACA 33085 >seq126 Length=110913 Score = 196 bits (216), Expect = 6e-45 Identities = 567/859 (66%), Gaps = 19/859 (2%) Strand=Plus/Plus Query 78068 TTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAG 78127 || || || ||||||||||| || || |||||||| || ||||| | || | ||||| Sbjct 97389 TTCAACGCCGGTACTCCCCGACCCCAAATGTCATCATGCTTCCTCGTGGCCATGAAGGAT 97448 Query 78128 GACTCTATTAATGGTATATACGGGACTCTCACAGA-GTGTGCTCAGATTTCTAAGTGGGC 78186 ||||| ||| ||||||| |||| ||||||| ||| ||||||||||| || ||| || Sbjct 97449 GACTCCATTGATGGTATCTACGATACTCTCA-AGACCTGTGCTCAGATCTCCAAGACTGC 97507 Query 78187 TGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAAC 78246 |||||||| |||||||| |||||| || | ||||| || ||| ||| || || Sbjct 97508 CGGTGGTATTGGTCTTCACATTCACAATATCCGTGCGAAGGGCTCCTACATTGCCGGTAC 97567 Query 78247 TAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTA 78306 |||||| | || | || || ||||||||||| | | | | | || ||||| || || Sbjct 97568 CAATGGTTACTCCAACGGCATCATTCCTATGCTCCGAGCTTACGACGCCACAGCTCGATA 97627 Query 78307 TGTCAACCAAGCGGGTCGTAGGAAG------GGGTCATTCGCTATGTACCTTGAACCTTG 78360 || | ||| ||| ||| ||| || | ||||| || || ||||| ||||| Sbjct 97628 CGTTGATCAA---GGTGGTAACAAGCGTCCTGGTGCCTTCGCCATCTATCTTGAGCCTTG 97684 Query 78361 GCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCG 78420 |||||| |||||| | || || | || | | ||||| ||| | ||||| | || Sbjct 97685 GCACGCTGATGTATTTGACTTCATTGACTTAAGGAAGAACCATGGTAAGGAGGAGGTACG 97744 Query 78421 ATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGA 78480 | | ||| | ||| || | ||||| | |||||||| |||||| | || || Sbjct 97745 AGCTCGTGATCTTTTCTACGCCCTCTGGATCTCCGATCTTTTCATGAAGCGTGTCGAATC 97804 Query 78481 AGGAGGTAAATGGTCTCTTTTCTGTCCAGATAAGACTAAGGGTCTTTCAGATGTATACGG 78540 | || | ||| ||||| | ||||| | || || ||| | || || ||||| Sbjct 97805 CGATGGGGATTGGACTCTTATGTGTCCCGCCGAGTGCCCTGGACTTGCCGACGTTTACGG 97864 Query 78541 GGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTC-TCGCTATTAAGACAA 78599 |||||||| ||||| | || | |||| ||||| ||| | | | || || | Sbjct 97865 TGAAGAATTTGAAAAGCTTTATGAGAGCTACG-AGAGGCAGGGCAAGGGAAGGAAAACTA 97923 Query 78600 TTGATGCATCTGAA-CTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCG 78658 | | || | ||| || ||| || || || | |||||| ||||| || ||| Sbjct 97924 TCAAAGC-CCAGAAGCTTTGGTTCGCCATCCTCGAGGCTCAAACCGAGACTGGTGTCCCT 97982 Query 78659 TATATGCTATACAAAGACAGCTG-TAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCAT 78717 || || ||||| || |||| ||| ||||| ||||||||| |||| ||| ||| Sbjct 97983 TACATCTGCTACAAGGA-TGCTGCCAACTCCAAGTCCAACCAAAAGCACCTTGGTACCAT 98041 Query 78718 CAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATACACGGATAAGAATGAAACAGCTGT 78777 |||| | |||||| || || ||||| |||| || | | ||||| ||||| Sbjct 98042 CAAATCCAGTAACCTCTGTACTGAAATCATGGAGTATTCTTCTCCTGATGAAGTTGCTGT 98101 Query 78778 ATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGATCGAGAA-TTAAAGACATTTG 78836 |||||||| | ||| | ||||| || || || || | ||| | | | | || Sbjct 98102 CTGTAATCTTGCTTCTCTTGCTCTTCCTGCCTTCGTAGACCTGGAACGTCGCGTC-TATG 98160 Query 78837 ATTATTCAAAGCTCCACGAAATTACAAAAATCGTAACTAAAAATTTAAATCGTGTAATTG 78896 | | |||||| ||||| ||||| || | || || || || | | |||||| Sbjct 98161 ACTTCAAAAAGCTGCACGAGATTACCAAGGTTGTTACAAAGAACCTTGACACTGTAATCA 98220 Query 78897 ACCGTAACTACTACCCAGT 78915 |||||||||||| ||||| Sbjct 98221 CCCGTAACTACTATCCAGT 98239 >seq135 Length=33695 Score = 187 bits (206), Expect = 3e-42 Identities = 475/717 (66%), Gaps = 12/717 (2%) Strand=Plus/Plus Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| ||||||| || || || || | || || |||||||| | ||| ||||| Sbjct 14772 GTTCCTGCCTACTTCAACGACTCTCAGCGTCTCGCCACTAAGGACGCCGGTGCCATTGCC 14831 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| | || | |||||||| ||||| || || || || ||||| || ||||| Sbjct 14832 GGTCTTGAGGTGCTCCGTATTATCAACGAACCTACTGCTGCCGCTATTGCCTACGGTCTT 14891 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 ||| |||| | || || || ||| || | ||||| || | ||||||||||| || Sbjct 14892 GACGAGAAGACCGAGGAGGAGCGAAACGTCCTCATCTTCGACTTGGGTGGTGGTACTTTC 14951 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 |||||||| ||||| | ||| | || | ||| || ||||| ||||||||||| Sbjct 14952 GATGTCTCTCTTCTTACCATTCAGGGCAAGGTCTTCTCTGTCAAGGCCACTGCTGGTGAC 15011 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGT---CATTTGTCTGATGAG 196018 |||||||| |||||||| || ||||| || | |||| | || || | |||| Sbjct 15012 ACTCATCTTGGTGGTGAGGACTTCGA-CAACAAC--CTCCTTGAGCACTTCAAGGCTGAG 15068 Query 196019 TTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGG 196078 ||| | |||| ||| || || |||| | | | ||| | || || | || Sbjct 15069 TTCAAGAGGAAGACCAAGCTTGACATCTCTGACGACGCCCGTGCTTTGCGACGATTGAGA 15128 Query 196079 ACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATT 196138 |||| ||||| ||||| || |||||||||||||| |||| || | || ||| | Sbjct 15129 TCTGCTTGTGAGCGTGCTAAGCGAACTCTCTCTTCCGTTACTCAGACCACCGTCGAGGTC 15188 Query 196139 GATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAG 196198 || || | | | || | ||||||| | | | || |||||||| | || || ||| Sbjct 15189 GACTCTCTCTACCAGGGTACCGACTTCTCTTCCAACATCACCCGTGCTAGGTTCGAGGAG 15248 Query 196199 TTAAACTCTGATTTGTTTAGGAAGTGTA---TGGAACCTGTTGAACAAGTACTTCGTGAC 196255 | ||| | | | | || |||| || | || || || || | || || ||| Sbjct 15249 ATCAACGCCG--TCGCTT-TCAAGTCTACCGTTGACCCCGTAGAGAAGGTCCTCAAGGAC 15305 Query 196256 GCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATT 196315 | ||||| | | |||||||| || ||||||||||| || || || |||||||| Sbjct 15306 TCCAAGATCCCTGCCGCCAAGGTTGACGACATTGTCCTTGTTGGTGGTTCTACCCGTATC 15365 Query 196316 CCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATC 196375 || ||||| ||| | | || | ||| | | | | ||||| | ||| Sbjct 15366 CCCAAGATCCAATCTCTCGTCTCCGAGTACTTTGGTGGTCGTCAGCTCAACAAGTCCATC 15425 Query 196376 AACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGT 196432 ||||| || || || |||||||| ||||| ||||| |||||||| | ||| | ||| Sbjct 15426 AACCCCGACGAGGCTGTTGCTTACGGTGCCGCCGTCCAGGCTGCCGTCCTCACCGGT 15482 >seq296 Length=56937 Score = 156 bits (172), Expect = 6e-33 Identities = 200/273 (73%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 || ||||| ||||| || ||||| | | |||||||||||||||||| || ||| | | Sbjct 272 CCTGAAGAGATTTCTTCCATGGTTCTTACTAAGATGAAGGAGACTGCTGAGGCTTACCTC 213 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 ||| || || | || ||||| || || || || ||||||| || || ||||| Sbjct 212 GGTGGCACCGTCTCCAAGGCCGTTGTTACCGTCCCCGCCTACTTCAACGACTCTCAACGT 153 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGA 195810 ||||| || |||||||||| ||| ||||| ||||| | |||| | | || ||||| || Sbjct 152 CAGGCTACCAAGGACGCTGGTGCCATTGCCGGTCTCGA-TGTCCTCCGTATCATCAACGA 94 Query 195811 ACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGT 195870 || || || ||||| || ||||| ||||| |||||||| || | || || || || Sbjct 93 GCCTACTGCCGCTGCTATCGCTTACGGTCTTGACAAGAAGTCTGAGGGCGAGAAGAACGT 34 Query 195871 ATTGATCTTTGATCTCGGTGGTGGTACGTTTGA 195903 |||||||| || || ||||||||||| || || Sbjct 33 TTTGATCTTCGACCTTGGTGGTGGTACTTTCGA 1 >seq293 Length=16276 Score = 154 bits (170), Expect = 2e-32 Identities = 461/709 (65%), Gaps = 12/709 (2%) Strand=Plus/Plus Query 196131 TTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTT 196190 ||||||| || || | || ||||| || |||||||| || | || |||||||| || | Sbjct 2 TTGAGATCGACTCTCTCTTCGACGGTATCGACTTCTACACTTCCATCACCCGTGCCCGAT 61 Query 196191 TTGAAGAGTTAAACTCT---GATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTAC 196247 | || ||| | || | || | || | ||||| || || || | || | Sbjct 62 TCGAGGAGCT---CTGTCAGGACCTCTTCCGATCCACCATGGACCCCGTCGAGAAGGTTC 118 Query 196248 TTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAA 196307 | || ||| | ||||| || ||||| ||| | || || |||||||| || || || | Sbjct 119 TCCGAGACTCCAAGATCGACAAGTCCTCCGTTAACGAGATCGTCCTTGTCGGTGGTTCCA 178 Query 196308 CCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACA 196367 ||||||| || ||||| || || | |||| | | ||| | ||| |||| Sbjct 179 CCCGTATCCCCAAGATCCAGAAGCTTGTTTCCGACATGTTCTCTGGCCGAGAGCCCAACA 238 Query 196368 AAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCT 196427 | |||||||| || || || || || |||||||| ||||| ||||||||||| || Sbjct 239 GGTCCATCAACCCCGACGAGGCTGTCGCCTATGGTGCCGCCGTCCAGGCTGCTATCCTTA 298 Query 196428 CAGGTGTTGACAATAATAACGTC---CAAGATCTTCTGCTACTTGATGTTGCACCCGTAT 196484 | || ||||| | | | | | || || | || | || || ||||| || | | Sbjct 299 C---TGGTGACACTTCTGAGGCCACTCAGGACTTGCTCTTGCTCGACGTTGCTCCTCTTT 355 Query 196485 CCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTA 196544 || ||||| | || || || |||||| | ||||| | || | |||||||| ||| Sbjct 356 CCATGGGTATCGAGACTGCTGGTGGTATCATGACCCCCTTGATCAAGAGGAACACCACTG 415 Query 196545 TTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATA 196604 | || || |||||| | ||||| || || || || || || || || ||||| | Sbjct 416 TCCCCACCAAGAAGTCTGAGGTCTTCTCTACCTACTCTGACAACCAGCCTGGTGTCTTGA 475 Query 196605 TTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCG 196664 | || || | || || || || | | ||||| | | | || || | || | Sbjct 476 TCCAGGTCTTCGAGGGTGAGCGAGCTAAGACTAAGGACTGCAACTTGCTCGGCAAGTTTG 535 Query 196665 ATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATA 196724 | | | || || || |||| ||| |||||||||| ||||| | |||| ||||||| Sbjct 536 ACCTTTCCGGTATCCCCCCTGCTCCCCGAGGTGTTCCTCAGATCGAGGTTTCCTTCGATG 595 Query 196725 TAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAA 196784 | ||||| || || || | ||||| | || | |||||| || | || || | | Sbjct 596 TTGACGCCAACGGTATCTTGAACGTTAACGCCGCCGACAAGTCTACCGGTAAGAGCAACA 655 Query 196785 AGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGA 196833 |||| || ||||| |||||||| || | || |||||||| || || Sbjct 656 AGATCACCATCACCAACGACAAGGGCCGATTGTCCAAGGAGGAGATCGA 704 >seq157 Length=78573 Score = 116 bits (128), Expect = 5e-21 Identities = 120/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 171883 CTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAA 171942 ||||| ||||| || |||||||||||||||||||| || ||||| ||||| || |||| Sbjct 51657 CTTACCGGAAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACCATCGACAATGTCAAG 51598 Query 171943 GCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGT 172002 ||||||| || || ||||| || ||||| || || || || ||| | || || || || Sbjct 51597 TCCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAACAGCGATTGATCTTCGCCGGA 51538 Query 172003 AAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 || ||||| || || || | ||||| |||| |||| Sbjct 51537 AAGCAGCTCGAGGACGGCAGGACCCTTTCTGACTACA 51501 >seq480 Length=233832 Score = 113 bits (124), Expect = 6e-20 Identities = 282/417 (68%), Gaps = 21/417 (5%) Strand=Plus/Minus Query 198539 TGGTGCCCGAATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCT 198598 ||||||| ||| || || |||||| | || ||||| |||||||||| ||||| || || Sbjct 94872 TGGTGCCAAAATTCCTCGGGGTGCTATCCTTTCCGGTCCCCCGGGTACCGGTAAGACTCT 94813 Query 198599 TCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCCTTTCTT-CAGTGCTCCGCGGC-G 198656 ||| || |||| ||| || ||| | |||| || || ||| | || ||| | | | Sbjct 94812 TCTCGCCAAGGCTACCGCCGGAGAAGCTGGTGTGCCTTTCCTTTCCGT-CTCTGGTTCTG 94754 Query 198657 AGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAA 198716 |||| | |||| ||||| || || || ||| | || ||||| || | || | | Sbjct 94753 AGTT-CGTCGAAATGTTTGTCGGCGTCGGTCCCTCCCGAGTCCGTGACTTGTTCGCAAAC 94695 Query 198717 GCACGTGAA-AATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGTAAGAA 198775 || | ||| ||| ||||||||||||||| ||||||| || ||||| | || ||| Sbjct 94694 GC-CAAGAAGAATGCCCCATGTATCATCTTCGTTGATGAAATCGACGCCATCGGCAAGTC 94636 Query 198776 GCGTGG------TGGAACTACTACACCTGGTAATGATGAGCGTGAGCAGACGATTAACCA 198829 ||||| ||| | ||| |||||| ||||||||||| || | ||||| Sbjct 94635 CCGTGGCAAGGGTGGCA--ACTTTGG-TGGTAACGATGAGCGTGAATCCACTTTGAACCA 94579 Query 198830 GCTTCTCACTGAGATGGATGGTTTTGA---CAATGAGACTGGTATCGTGGTGATTGCTGC 198886 |||| | || ||||| ||||| | ||| ||| | |||| || | |||| Sbjct 94578 GCTTTTGGTCGAAATGGACGGTTTCGGTACCAACGAGCACG---TCGTCGTTTTGGCTGG 94522 Query 198887 TACAAATAGGATTGATATCCTAGATGATGCACTGCTTCGTCCCGGTCGATTCGACCG 198943 ||| || || |||| |||| ||| ||| | | ||||| |||||||||||||| Sbjct 94521 TACGAACAGACCTGATGTCCTTGATTCTGCCTTAATGCGTCCTGGTCGATTCGACCG 94465 >seq34 Length=33051 Score = 109 bits (120), Expect = 7e-19 Identities = 195/281 (69%), Gaps = 14/281 (5%) Strand=Plus/Plus Query 195711 CAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTG 195770 |||| | ||||| ||||||||||||| || || || || ||||| || ||||| |||| Sbjct 15554 CAGTCATCACTGTCCCTGCTTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGATGCTG 15613 Query 195771 CTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 |||| || ||||| | ||| | | ||||| || || || || ||||| ||| Sbjct 15614 GCTCTATCGCTGGTCTTGAAGTCCTTCGTGTCATCAACGAGCCTACTGCCGCTGCTCTTG 15673 Query 195831 CTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTG--ATCTTTGATCTCGG 195888 | |||||||| ||||||||| || || | || |||| ||| || | || Sbjct 15674 CCTATGGTCTCGACAAGAACGAGTCCGCGG-------TG-ATTGCTGTCTACGACTTGGG 15725 Query 195889 TGGTGGTACGTTTGATGTCTCACTTCTCAATAT--TGAAGGTGGTATATTCGAAGTAAAG 195946 ||||||||| || ||| |||| | || | || |||| ||| | ||||| || ||| Sbjct 15726 TGGTGGTACTTTCGATATCTCGATCCTTGAGATGCAGAAG--GGTGTTTTCGAGGTCAAG 15783 Query 195947 GCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||| ||||| || || || ||||||||||| ||||| Sbjct 15784 TCTACCAACGGTGACACCCACCTTGGTGGTGAAGACTTCGA 15824 >seq384 Length=45667 Score = 95.1 bits (104), Expect = 2e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 195881 GATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAA 195940 || || ||||||||||| || |||||||| || ||| |||||| | ||| | || || Sbjct 18591 GACCTTGGTGGTGGTACTTTCGATGTCTCTCTCCTCTCTATTGAGGACGGTGTCTTTGAG 18532 Query 195941 GTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||||||||||||| ||||| || |||||||| |||||||| Sbjct 18531 GTCTTGGCTACTGCTGGTGACACTCACCTTGGTGGTGAGGATTTCGA 18485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657858337699680