Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220
15.1_202017-07-20] 494 sequences; 18,606,003 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq126 168 7e-37
seq157 152 6e-32
>seq126
Length=110913
Score = 168 bits (186), Expect = 7e-37
Identities = 449/679 (66%), Gaps = 8/679 (1%)
Strand=Plus/Plus
Query 53294 CTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAG 53353
|| |||||||| ||||| | || || ||||| |||||||| ||||| ||||||
Sbjct 97386 CTTTTCAACGCCGGTACTCCCCGACCCCAAATGTCATCATGCTTCCTCGTGGCCATGAAG 97445
Query 53354 GATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGG 53413
|||||||| || || || |||||||| || |||||| ||||| || |||||||||
Sbjct 97446 GATGACTCCATTGATGGTATCTACGATACTCTCAAGACCTGTGCTCAGATCTCCAAGACT 97505
Query 53414 TCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGG 53472
| |||||||| ||| | ||| | | | || |||||||||| ||| | || ||
Sbjct 97506 GCCGGTGGTATTGGTCTTCACATTCAC-AATATCCGTGCGAAGGGCTCCTACATTGCCGG 97564
Query 53473 GACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCG 53532
|| || || | || | || ||| | ||||||||||| | | | || ||| || ||
Sbjct 97565 TACCAATGGTTACTCCAACGGCATCATTCCTATGCTCCGAGCTTACGACGCCACAGCTCG 97624
Query 53533 GTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTG 53592
||||| | || |||||| ||||| || | ||||||||||| || ||||| ||
Sbjct 97625 ATACGTTGATCAAGGTGGTAACAAGCGTCCTGGTGCCTTCGCCATCTATCTTGAGCCTTG 97684
Query 53593 GCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCG 53652
|||||| || | | || || | || | | ||| || ||| | || ||| | ||
Sbjct 97685 GCACGCTGATGTATTTGACTTCATTGACTTAAGGAAGAACCATGGTAAGGAGGAGGTACG 97744
Query 53653 CTGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGA 53711
||||| || || ||| || || ||||| | || || |||||| || ||| ||
Sbjct 97745 AGCTCGTGATCTTTTCTAC-GCCCTCTGGATCTCCGATCTTTTCATG--AAGCGTGTCGA 97801
Query 53712 A--GGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTA 53769
| || | ||| ||| || ||||| || ||||||||| || || | || ||
Sbjct 97802 ATCCGATGGGGATTGGACTCTTATGTGTCCCGCCGAGTGCCCTGGACTTGCCGACGTTTA 97861
Query 53770 CGGTGAGGAGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAA 53829
|||||| || ||| | || | ||| || |||| |||||| | ||| |
Sbjct 97862 CGGTGAAGAATTTGAAAAGCTTTATGAGAGCTACGAGAGGCAGGGCAAGGGAAGGAAAAC 97921
Query 53830 GGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCC 53889
|||| || | || | ||| || |||||| || || ||||| || ||
Sbjct 97922 TATCAAAGCCCAGAAGCTTTGGTTCGCCATCCTCGAGGCTCAAACCGAGACTGGTGTCCC 97981
Query 53890 GTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCAT 53949
||||| |||||||||||| | | |||| ||| |||||| ||| || | || |||
Sbjct 97982 TTACATCTGCTACAAGGATGCTGCCAACTCCAAGTCCAACCAAAAGCACCTTGGTACCAT 98041
Query 53950 CAAATCGAGCAACTTATGT 53968
|||||| || ||| | |||
Sbjct 98042 CAAATCCAGTAACCTCTGT 98060
>seq157
Length=78573
Score = 152 bits (168), Expect = 6e-32
Identities = 291/426 (68%), Gaps = 2/426 (0%)
Strand=Plus/Plus
Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211
||||| |||||||| ||||||||||| |||| | ||| || ||| || | | | |
Sbjct 70475 CCAGTACCGATACCATCTGCACCATTGATCAATACCATTGGAACGGTGGGCATGAAATAA 70534
Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271
|| || || | ||| ||| || || | ||| ||||||| | | | || ||
Sbjct 70535 TCTGGTTCAATGCGCATACCATCCTCGACCAAGTAGTTGAGCAACCCGTCATCTGCAGGG 70594
Query 117272 TCGAATATGTTCTTG-GTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGC 117330
| ||| || | || | ||| | ||| ||| ||||| || ||||| | || ||
Sbjct 70595 TGGAAGAT-TGCTCGAGTCATCCGTGGAAGGTTTGTGAAGATATAACGGGCAGAAGCTGC 70653
Query 117331 ATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTT 117390
|| || ||||| |||||||| ||||| ||||| || | || |||| || || | |||
Sbjct 70654 GTCTTTACCACCTGCAAGACGAGTACCAAATTGGCCGTTGGGATCCAGCAGATTGATGTT 70713
Query 117391 GTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACC 117450
||| ||| || |||||||| || ||| |||||| || | || || |||||
Sbjct 70714 GTTACTGCCGACGAAGTTTTGTGCTAAGCCGACAATGGTGGAAGTCAAACTGGCTTCACC 70773
Query 117451 ATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGA 117510
||||||||| || || | ||||| |||||||| || |||||||| ||||| || |||
Sbjct 70774 ATGGTGATATGCGGTTTTCTCCGAAACGTAGCCGGCAAGCTGAGCGACCTTGATTTCTTT 70833
Query 117511 CGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATC 117570
|| ||||| ||||| || || | | ||||| ||||||| || || ||||| ||
Sbjct 70834 GGTGAGGTTTCGCTTGAAACAACCAAAGAGAACCTTTCGCTGACCAGGTTTGAGACCGTC 70893
Query 117571 CGCCAC 117576
|||||
Sbjct 70894 GGCCAC 70899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547212620941200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |