Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220 25.1_202017-07-20] 568 sequences; 18,568,655 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq388 100 3e-16 >seq388 Length=79685 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | ||| | |||| |||||||| ||||| |||||||| ||| Sbjct 78420 CCACCACGCAGACGGAGAACAAGGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGAA 78361 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | || || ||||||||||||||| | |||| ||||||||||| ||||| Sbjct 78360 AGAGTACGACCATCCTCAAGTTGTTTACCAGCAAAAATCAATCGTTGCTGATCAGGAGGA 78301 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| ||||| ||| || || | | || | ||||| | | || ||| Sbjct 78300 ATACCTTCCTTGTCCTGAATCTTCGCCTTAACGTTGTCGATAGTGTCAGACGACTCGACT 78241 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | ||| | ||||| |||||||| || || || || || |||||| Sbjct 78240 TCGAGAGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCATA 78193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488540531337600